Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1599 ATGGGACATTGTTGCAGCAAAAACGTTTCGGTCGTCAACAATGAAACTGTTACAGCCGATCACCGCCCTAAATCGCCGCAGCCGGCGGCATCGCCCCTGCCGTCCGGCGACTCAGTGTCAGGAGCGGGCGATGCAACCCCTGGCAGGAACACTTCCGCGCAGTACTTCACTAGTCCCCCCTTCCCGAGCCCTCTCCCGCCTGGGGTGGCGCCATCGCCGGCCAGAACTCCGGGTAGGAAATTCAGATGGCCTCTTCCGCCTCCATCGCCGGCGAAGCCGATCATGGCAGCGTTACTGAGACGGCAGGGGAAAGCGAAACCCAAGGACGGGCCGATACCCGAGGAGCAAGCCGAAGGTGGAGAGGGAGACAGGCCGTTGGACAAGAGCTTCGGATATGCAAAGAATTTGGGGGCAAAGTACGAGCTGGGAAAAGAAGTAGGTCGGGGACATTTTGGTCATACTTGCTGGGCGAAAGCAAAGAAGGGAGACCTCAAGGGGCAATCCGTAGCCGTGAAAATCATATCGAAAGCTAAGATGACAACAGCAATAGCAATTGAAGATGTAAGGAGGGAGGTGAAGATGTTGAAAGCCTTATCTGGACATAATAATTTGGTGAAATTTCATGATGTATTTGAGGACGCCAATAACGTATACATAGTGATGGAATTGTGTGAGGGTGGAGAACTACTTGACAGAATTCTTTCAAGAGGTGGAAGATACACTGAGGATGACGCAAAAGCAATTCTTGTACAAATTCTAGATGTAGTTGCCTTTTGTCATCTCCAAGGAGTCGTTCACCGTGATTTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGAAGATGATTCTCTGATGAAGGTTATCGATTTTGGTCTATCGGATTTTGTTAGACCAGAACAACGCCTCAATGATATTGTTGGCAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGCAGACTTATGGAGTATCGGTGTTATTACATACATATTGTTATGTGGAAGTAGACCATTCTGGGCACGCACTGAATCAGGAATCTTCCGGTCTGTGCTAAGAGCTAATCCTAACTTTGATGATTTACCTTGGCCATCAATATCACCAGAAGCTAAGGACTTTGTAAAGAGGCTTTTGAACAAGGACCATAGAAAAAGGATGTCTGCTGCCCAAGCTCTAGCCCATCCATGGTTGAGAGATGAAAAACGTGCCATTCCATTAGACATTTCAATCTTCAAGTCGGTCAAGTTATATGTGCGGGCCACGCCTTTCAAACGAGCCGCACTGAAGGCTCTCTCAAAAGCATTGCCAGAAGATGAACTCTTCTTTCTAAGAACACAATTCCGCCTATTAGAACCAAACAATGGTTTTGTTTCTCTTGATAATTTTAGAGCGGCTCTCATGAAAAATGCTACTGATACCATGAAGGAATCAAGGGTCCCTGACATTTTAAATTTGATGGAGGCGCTGGCTTATAAAAAAATGGATTTTGAAGAGTTTTGTGCCGCCGCACTCAGTGTATACCAGCTCGAGGTTCATGAAGACTGGGAGAGAATTGCAACCACTGCTTTCGAGCATTTCGGGGGAGGAAACAGAGTCATTTCAGTTGAGGAGTTGGCGCAGGATATGAATCTGGGTCCTTCAGCTTACACCATAATACGTGATTGGATCAGAAAAACTGATGGAAAACTGAGTTTCAGCGGATATACCAAGTACATGCATGGTATCACAATACGTAGTTCAAATCCAAGACAGCGACAGCTAGTATGA 1782 0.4646 MGHCCSKNVSVVNNETVTADHRPKSPQPAASPLPSGDSVSGAGDATPGRNTSAQYFTSPPFPSPLPPGVAPSPARTPGRKFRWPLPPPSPAKPIMAALLRRQGKAKPKDGPIPEEQAEGGEGDRPLDKSFGYAKNLGAKYELGKEVGRGHFGHTCWAKAKKGDLKGQSVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHNNLVKFHDVFEDANNVYIVMELCEGGELLDRILSRGGRYTEDDAKAILVQILDVVAFCHLQGVVHRDLKPENFLFVSKEDDSLMKVIDFGLSDFVRPEQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARTESGIFRSVLRANPNFDDLPWPSISPEAKDFVKRLLNKDHRKRMSAAQALAHPWLRDEKRAIPLDISIFKSVKLYVRATPFKRAALKALSKALPEDELFFLRTQFRLLEPNNGFVSLDNFRAALMKNATDTMKESRVPDILNLMEALAYKKMDFEEFCAAALSVYQLEVHEDWERIATTAFEHFDXGGNRVISVEELAQDMNLGPSAYTIIRDWIRKTDGKLSFSGYTKYMHGITIRSSNPRQRQLV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1599 594 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1599 594 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1599 594 MobiDBLite consensus disorder prediction 1 128 - -
Prci2g1599 594 FunFam CDPK-related kinase 1 438 509 - -
Prci2g1599 594 Gene3D Transferase(Phosphotransferase) domain 1 230 419 - -
Prci2g1599 594 MobiDBLite consensus disorder prediction 59 73 - -
Prci2g1599 594 FunFam Calcium-dependent protein kinase SK5 312 407 - -
Prci2g1599 594 SUPERFAMILY Protein kinase-like (PK-like) 139 423 IPR011009 -
Prci2g1599 594 MobiDBLite consensus disorder prediction 102 128 - -
Prci2g1599 594 Gene3D - 420 578 - -
Prci2g1599 594 FunFam CDPK-related kinase 1 133 228 - -
Prci2g1599 594 PANTHER SERINE/THREONINE-PROTEIN KINASE 125 566 - -
Prci2g1599 594 MobiDBLite consensus disorder prediction 44 58 - -
Prci2g1599 594 SUPERFAMILY EF-hand 435 580 IPR011992 -
Prci2g1599 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Prci2g1599 594 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Prci2g1599 594 Gene3D Phosphorylase Kinase; domain 1 133 229 - -
Prci2g1599 594 Gene3D - 441 509 - -
Prci2g1599 594 CDD STKc_CAMK 139 401 - -
Prci2g1599 594 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1599 594 MobiDBLite consensus disorder prediction 7 21 - -
Prci2g1599 594 FunFam CDPK-related kinase 3 132 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1599 Prci-Chr2 11930768 11937540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1599 1 585 EF-hand Containing Proteins AT3G50530 57.344 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci2g1599 Pkinase 6.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1599 K13412 - gmx:100803631 983.4