Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1541 ATGGATTTTATGGTCCCACTGCCATATGAAAGCAACCCAATTTTCCCGGAACTCGAAAATTTCGACTCCAACTTTTCTGGGTTTGATTACAATTTCTCTGTTGTTCATGATGACTTTGCGATCGACGAAAAGCCTATTACCTTTGTTCTACCCAATACCTCCTTGTGCGAGAGTTTTCCGGTTCCCATGGGCCAATCTTCGAGCTCCATGGTAATGGGAAATGGGTCGGCCCCTTCGATTAAAGAAGAAGATGAGACCAGGAACAGGATTAGCTCTCACAGAAACAAGAGATCAGCCTGTTTGGAATTAGATGATATAAGGAAGTATTTTGATGTTCCCATAACAAAAGCAGCGAAAGAACTGAACGTGGGACTGACCCTCCTCAAGAGAAGATGCAGAGAGCTGAATATTACCAGGTGGCCTCATAGAAAAATCAAGAGCTTGAAGGCTCTCATCGACAATGTCAAGGAACTGGGATTGGCCGATGAGGTGGCTATGTTGGAGAAGCATAAGAAGCTTATGGAGAAGCTTCCAGATATGGAACTTAGCGACAAAACTAAGAAGCTTAGGCAAGCATGTTTCAAAGCTAATTACAAAAGGAGAAGATCATTGGCGTTTCAATCCCAAGCCTGA 633 0.4344 MDFMVPLPYESNPIFPELENFDSNFSGFDYNFSVVHDDFAIDEKPITFVLPNTSLCESFPVPMGQSSSSMVMGNGSAPSIKEEDETRNRISSHRNKRSACLELDDIRKYFDVPITKAAKELNVGLTLLKRRCRELNITRWPHRKIKSLKALIDNVKELGLADEVAMLEKHKKLMEKLPDMELSDKTKKLRQACFKANYKRRRSLAFQSQA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1541 210 PANTHER PROTEIN RKD4 62 209 IPR044607 GO:0003700
Prci2g1541 210 ProSiteProfiles RWP-RK domain profile. 82 169 IPR003035 -
Prci2g1541 210 MobiDBLite consensus disorder prediction 66 93 - -
Prci2g1541 210 Pfam RWP-RK domain 101 148 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1541 Prci-Chr2 11465275 11466347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1541 101 205 AtRKD Transcription Factor Family AT5G53040 67.619 1.15e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Prci2g1541 RWP-RK 1.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1541 - - pcin:129301849 417.927