Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1534 ATGGGGAAGAAGGGTGGAGGCGGTTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCTTCTCCTAAGGACTCGCCGGTGCCGGAGAGGAAGAAGGAAGATGAGGTGAAACGGCAACATGAAGCACCAGAGGTTGTGTTGTTTGAGCTTTTTCCTGCAGAGAGTTCTCCTGATGATATTACCAATGAGGAGAGTACCACGTCAACGCCTGTGACTGAAGATCGAAGACATGCCGTTGCTGTTGCGGCAGCAACTGCTGCAGCTGCTCAGGCAGCGGTGGCAGCTGCTCAGGCAGCGGCGAGAGTGGTTCATATGGCAGGTTATGGACGACAATCCGAGGAAGATAGAGCAGCAACACTCATTCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACGGCGTGCTTTGAAGGGATTGGTGAGACTGCAAGCGCTTGTGAGAGGTCACAATGTAAGGAAGCAAGCACAAATGACAATGCGTTGTATGCAAGCGTTGGTGAGAGTGCAGGCCAGAGTCAGAGCTCGCAGACTCCAACTGACCCATGACAAGATTTACAAGAACGTGATGGAACATGATTTAGTGCCCATGAGCCCCTTATACAATGATGGTTGGAACGCTAGGCGTCACAGTTTCCAGAGAATCAATGAAAGTGACTTGTGGAAACATGAAGATGCAATGAAGAGGGAGAGGGCTCTTGCTCACGCTTTTAACTATCAGCAATGGAAACAGTGGCCACATGCGGGCCTGAATCCTGGTGATGAAGAAATGGGAACATATACCAGTGAGCTTGAACAAGCCAAGCAGGGTTGGAACTGGTTAGAACGTTGGATGTCCTCTCAAAAACATCAAGCGATGCCCTTGGGGCCGCCTGAAACCTCTTATCGCATGACCCAAGCTGTTACAACCACCACCACTGCAGATGACATGTCTGAGAAGACGGTGGAAATGGACATTGTTGCACCTCCGAACTCAAGCAACACCATCATGGGCCAAGGCCTTCTTCTTGATTCAAGTCCAATTCCCAATAGGCGGCCCCATGATCTGCAGCCCCTGGCCAACCCAAGTATACCGAGCTATATGGCTCCGACCCAGTCTGCAAAGGCCAAGGTAAGGGGTCAAGGCCCGGTCAAGCCGCGTGGCTCTTCTGTGCCACAGTGGAATTCTTCAACTAAGAAGAGCTCCGTTATTGAGTCGGGGTGTGACTCCCCTATCTCAGGTGGAGGAACGGCAAGTAATCTATTTATGAAGAGCCCAGGCCCAAAAATTAGTGGGGCCAGGCTACAGTCTAAACGGATCGCGGGAGGAAGCACAGACTATGCTGGTACGGAGGATTGGACACTGCCTCTGGGAGCACATGCTTGGGCATGA 1368 0.5146 MGKKGGGGWFSSVKKVFKSSPKDSPVPERKKEDEVKRQHEAPEVVLFELFPAESSPDDITNEESTTSTPVTEDRRHAVAVAAATAAAAQAAVAAAQAAARVVHMAGYGRQSEEDRAATLIQSYYRGYLARRARRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLTHDKIYKNVMEHDLVPMSPLYNDGWNARRHSFQRINESDLWKHEDAMKRERALAHAFNYQQWKQWPHAGLNPGDEEMGTYTSELEQAKQGWNWLERWMSSQKHQAMPLGPPETSYRMTQAVTTTTTADDMSEKTVEMDIVAPPNSSNTIMGQGLLLDSSPIPNRRPHDLQPLANPSIPSYMAPTQSAKAKVRGQGPVKPRGSSVPQWNSSTKKSSVIESGCDSPISGGGTASNLFMKSPGPKISGARLQSKRIAGGSTDYAGTEDWTLPLGAHAWA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1534 455 PANTHER IQ-DOMAIN 5-RELATED 1 389 - -
Prci2g1534 455 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Prci2g1534 455 MobiDBLite consensus disorder prediction 1 43 - -
Prci2g1534 455 Gene3D - 112 165 - -
Prci2g1534 455 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Prci2g1534 455 SMART iq_5 134 156 IPR000048 GO:0005515
Prci2g1534 455 SMART iq_5 112 133 IPR000048 GO:0005515
Prci2g1534 455 MobiDBLite consensus disorder prediction 380 412 - -
Prci2g1534 455 MobiDBLite consensus disorder prediction 21 43 - -
Prci2g1534 455 MobiDBLite consensus disorder prediction 54 73 - -
Prci2g1534 455 Pfam Protein of unknown function (DUF4005) 338 400 IPR025064 -
Prci2g1534 455 MobiDBLite consensus disorder prediction 370 412 - -
Prci2g1534 455 Pfam IQ calmodulin-binding motif 115 131 IPR000048 GO:0005515
Prci2g1534 455 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1534 Prci-Chr2 11406415 11410472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1534 1 395 IQD Protein Family AT3G49260 51.508 5.74e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1534 - - aprc:113873497 463.766