Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1527 ATGTGCCACCAGTGCTGGAGGAGTGATAGGAGTGGGGTTATCAATTGTGCCAATTGCAAACGGAAGCGATATTGCTATGAGTTCTTAACAAAATGGTACCCAGACAAAACAAGAGAGGAGATAGAGTTTTCCTGTCCCTTTTGCCTTGGTAATTGCAATTGTCGGTTGTGTTTGAAGGAGGCTGTATCTGCAGAGGCTGCAAGTGTTGAATCAGATGCTTATATCAATTTGCTGAAGTTGCTTTACTTGCTTAAGAAAATTCTGCCTTTACTCCAGCATATCCAGCAAGAGCAGAGATTGGAAATGGAAATAGAATCTAGCTTACATGGTTTACTGCTGACAGAAGAAAATATCATGCAGTCGCAGATTGATGATGATGATCGAGTGTATTGTGACAACTGTAATACATCCATCGTCAACTTGCACAGAAGTTGTCCTGATCCTAATTGTAGTTACGATCTCTGTCTCACTTGTTGCATGGAACTAAGAAGTGGACATAACTGTGAAGATGTTTCCACTAATGATGATGAAGGACGGGCTGATACCTCATCTGAATTTTCGTGGAAAGCAGATGCCAGTGGTAGGATTCCTTGCCCTCCAAAATCAAGGGGAGGCTGTGGGACTACAATTCTCTCATTGAGACGCCTTTTTAAAGCTAATTGGGCGAATGAATTGATTGGGAATGCAGAGGAACTTACCATCAAATATGAGCCCCCTAATGTTGATTCTACTAAAGGTTGTTCATTGTGCCATAATTTTAGGATGGATACAGTACAGGGTTTTGTAAGGCAGGCAGCTTCCAGAGGAAACTGTCATGATAATTTGTTGTTCTGCCCAAATGCTATGCACATGGGAGATACAGAATTCAAGCATTTCCAGATGCATTGGACAAGCGGCGAGCCTGTTATAGTTAGGAATGCATTTGAAAAGGCTAGGGGCCTTAGCTGGGATCCAATGGTGATGTGGAGGGCTTTTAGGGGGGCTAAGAGGATACTAAAAGAGGAGGCAACTGTGGTTAAAGCCATTGACTGCTTAGATTGGTGCGAGGTTGAAATTAATATCCTCCAGTTCTTCAAGGGCTACCTTGAAGGTCGTAGGTATAGAAATGGGTGGCCTGAGATGTTGAAGCTAAAGGATTGGCCTCCATCAAATGCTTTCGAAGAGTGTTTGCCTAGGCATGGTGCCGAGTTTATAGCTGTGCTACCATTTAGTGACTATACTCATCCCAAATCTGGGATTCTAAATCTCACTACAAAGCTACCTGTTATTTTAAAGCCAGATTTGGGCCCCAAAACATACATTGCTTATGGATCTTTAGAAGAGCTTGGTAGAGGTGATTCTGTAACAAAACTGCATTGTGACATCTCAGATGCGGTCAATATATTGACACATACAGCTGAAGTAAAGAGACCATCATGGCAAAGAAAAGCCATAAACAAATTACGGGAAAATCATGAAGCTGAAGATATGCGCCCGATCTATGGCATGAAGAATGAAGCATTGAGTACTTATAGAAAAAAAGAAAAATGGCACTGCCAAGATATAAGCATGAGTTCTAAAAGCCCTAGAAAAGAAGACATTATTATGGGAGAGTCTACTATAATTAAAAGTCAGGCATCGGAGGAAGAGAATATGAATGAACAGCAGAATAGATCCAGAGATCTTGGAGCCTCAGGAGCATATATATAAGCTTCTTTCCTTGAAAATGATCTGTCTGAGACTCAATATGGGAGTGCTGTATGGGACATATTTCGTAGGCAAGACGTGCCAAAGCTGACGGAGTACCTGAAGAAGCACTACAGAGAATTCCGCCACATAAATAATCTTCCAGTCAATTCTATAATACATCCAATTCATGACCAGACTCTTTATCTAAACGAAAAACACAAAAAGCAGCTAAAGGAAGAATTTGGTATTGAACCGTGGACATTTGAGCAACACGTTGGGGAGGCTGTTTTTATTCCTGCAGGGTGCCCGCACCAAGTGAGGAATAGACAATCTTGCATAAAAGTGGCTCTCGACTTTGTTTCACCTGAAAATGTTCAAGAGTGCGTTCGATTGACAAAGGAGTTTCGGGTGCTTCCAAAGAACCATAGATCTAAGGAAGATAAACTGGAGGAACGTAAGATGGCACTATACGCTGCTGACGCGGCTATAACTGAAGCCATGAAATTAATGCAGAGGATATGA 2190 0.4178 MCHQCWRSDRSGVINCANCKRKRYCYEFLTKWYPDKTREEIEFSCPFCLGNCNCRLCLKEAVSAEAASVESDAYINLLKLLYLLKKILPLLQHIQQEQRLEMEIESSLHGLLLTEENIMQSQIDDDDRVYCDNCNTSIVNLHRSCPDPNCSYDLCLTCCMELRSGHNCEDVSTNDDEGRADTSSEFSWKADASGRIPCPPKSRGGCGTTILSLRRLFKANWANELIGNAEELTIKYEPPNVDSTKGCSLCHNFRMDTVQGFVRQAASRGNCHDNLLFCPNAMHMGDTEFKHFQMHWTSGEPVIVRNAFEKARGLSWDPMVMWRAFRGAKRILKEEATVVKAIDCLDWCEVEINILQFFKGYLEGRRYRNGWPEMLKLKDWPPSNAFEECLPRHGAEFIAVLPFSDYTHPKSGILNLTTKLPVILKPDLGPKTYIAYGSLEELGRGDSVTKLHCDISDAVNILTHTAEVKRPSWQRKAINKLRENHEAEDMRPIYGMKNEALSTYRKKEKWHCQDISMSSKSPRKEDIIMGESTIIKSQASEEENMNEQQNRSRDLGASGAYIXASFLENDLSETQYGSAVWDIFRRQDVPKLTEYLKKHYREFRHINNLPVNSIIHPIHDQTLYLNEKHKKQLKEEFGIEPWTFEQHVGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVQECVRLTKEFRVLPKNHRSKEDKLEERKMALYAADAAITEAMKLMQRI 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1527 729 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 726 IPR045109 GO:0032454|GO:0033169
Prci2g1527 729 SMART cupin_9 390 692 IPR003347 -
Prci2g1527 729 ProSiteProfiles JmjC domain profile. 409 692 IPR003347 -
Prci2g1527 729 SUPERFAMILY Clavaminate synthase-like 288 716 - -
Prci2g1527 729 Pfam JmjC domain, hydroxylase 576 675 IPR003347 -
Prci2g1527 729 Gene3D Cupin 270 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1527 Prci-Chr2 11332093 11347924 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci2g1527 JmjC 9.3e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1527 K15601 - pop:7475185 936.791