Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1492 ATGAAGAAGCTCAAGCGTCACCCGCCGTCTCCCACAGCGGATCTCCGGCAATTGGACGCTGATTCCAAATATCTGTGCCCTGACACTCTTGTGAAATTGAAGAATGCTCGGCTGAGAAGACTTAAAATTCAGCGATTGAAGTTGAAGTATACTTGCGAAGCCAAAATCTATGTCGCCCCCGTTGATCGTCAGGAGGAGGGGACCGAGTTTGCGGAGTTGGAAAATAAAGATAGGAACATTGATGAGTCGATGCGGATATCATTGTCGCTAACGACGTCGTCGAAGGAGGATGATCGTTCGACTCTGGCGCCAAACAACGACGTCCTGGATGCTTTCAGAAGTGAGAAATACCGAGAGGATGGCTTTGATGCGGAGGATCTATCTTACGGTTCGGTGTCCTTGATAGGTCGTAGGAAAGAGATGGAAGATGCGGTGAGCGTGGAGGTGGGGTTTGTGGCGAAGGAGAGAATCAAGTGTGACTTCTTCGCAGTCTATGATGGCCACGGTGGGGCCCAGGTGGCGAGAGCGTGCCGAGAGCGGTTGTACCGACTGGTGGCGGAGGAGCTGGAAAGGCGTGGAAGAAACGGCGGTGAAGTGGATTGGGAGGGAATGATGGAAGGGTGTTTTGGCAAAATGGATAAGGAATTTGCGGACAATGCGGCGGTACGGACGGTGGGATCTACGGCAGTCGTGGCCGTGGTGGCAAAGGATGAGGTGGTTGTGGCCAATTGCGGTGACTGTAGGGCGGTGATGGGAAGAGGAGGCGAGGCTGTCGCCTTGTCTGATGATCACAAGCCTGACAGACCTGACGAGTTGATGCGAATAGAAGCCGCTGGCGGAAGGGTCATAAACTGGAACGGCCAACGCGTTCTAGGAGTTCTTGCCACCTCCAGGTCTATAGGAGACCAATACCTTCGACCTTACGTAATATCGAAACCAGAGGTGACGGTGACTAAGCGAACTAATGAGGATGAGTTTCTTATACTGGCGAGTGATGGCTTGTGGGACGTCATCTCCAGTGAAGCTGCGTGTGAGGTTGTAAGGAAGTGTCTAAGTGGCCAGGCCAGGCGGAATTCGCCGGAGCTTGAAAATCAAAGCCTCGCGAGTGAGGCTGCAGCTCTGTTAGCTGAACTGGCAATGGCAAAAGGAAGCGGAGATAACACAAGTGTGATCGTGGTTGAGCTCAGTAACCATAATAAATTCACTTCTCCTTGGTGCCAAATTAATTAA 1230 0.5195 MKKLKRHPPSPTADLRQLDADSKYLCPDTLVKLKNARLRRLKIQRLKLKYTCEAKIYVAPVDRQEEGTEFAELENKDRNIDESMRISLSLTTSSKEDDRSTLAPNNDVLDAFRSEKYREDGFDAEDLSYGSVSLIGRRKEMEDAVSVEVGFVAKERIKCDFFAVYDGHGGAQVARACRERLYRLVAEELERRGRNGGEVDWEGMMEGCFGKMDKEFADNAAVRTVGSTAVVAVVAKDEVVVANCGDCRAVMGRGGEAVALSDDHKPDRPDELMRIEAAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNEDEFLILASDGLWDVISSEAACEVVRKCLSGQARRNSPELENQSLASEAAALLAELAMAKGSGDNTSVIVVELSNHNKFTSPWCQIN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1492 409 ProSiteProfiles PPM-type phosphatase domain profile. 128 395 IPR001932 -
Prci2g1492 409 Pfam Protein phosphatase 2C 129 388 IPR001932 -
Prci2g1492 409 Gene3D - 124 403 IPR036457 -
Prci2g1492 409 SMART PP2C_SIG_2 142 395 IPR001932 -
Prci2g1492 409 PANTHER PROTEIN PHOSPHATASE 98 394 IPR015655 GO:0004722|GO:0006470
Prci2g1492 409 SMART PP2C_4 117 393 IPR001932 -
Prci2g1492 409 ProSitePatterns PPM-type phosphatase domain signature. 161 169 IPR000222 GO:0043169
Prci2g1492 409 FunFam Protein phosphatase 2C 51 122 403 - -
Prci2g1492 409 SUPERFAMILY PP2C-like 125 398 IPR036457 -
Prci2g1492 409 CDD PP2Cc 128 395 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1492 Prci-Chr2 11076560 11082241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1492 115 395 PP2C-type Phosphatase Gene Family AT2G29380 49.502 2.22e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1492 K14497 - gmx:100807235 412.92