Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1481 ATGTCAAAAGCGGGACCCATTGTTGATATGTTGCCAGAGAAAGATGCTGACGGTGGGTTTGCCAGTGGAGGGTGGAAAAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGCTTTAGAGGAAAAAGGGTTACCATGGAGGATTTCTATGATATCAAGATATCCAATATTGATGGTCGATCCATATGCTTGTTCGGAATATTTGATGGTCATGGTGGTTCCCGTGCTGCTGAGTATTTGAAGGAGCGTCTCTTCAATAACCTCATGAAGCATCCGAAATTTTTGACTGATACCAAATTGGCTATAAGTGAAACTTATCAACAGACTGATGCTGATTTTCTGGATTCTGAGAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTCTATGTTGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCCATAGCACTCTCTGAGGATCATAAACCAAATAGATCTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTCATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTGGCAGAACCTGAGATCCAGGAAGAGGTAATAGATGAAGAGCTGGAGTTGCTGGTACTTGCAAGTGATGGACTATGGGATGTAATGCCGAATGATGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCCGAAGCAGCTGCTCGTAGGCTAACTGAAGCCGCCTTTAGTCGGGGCAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGAGAAAGCAAACCCAGCTAATTCTGAGGAATCAGGTCCAGGATCCAGCTAG 894 0.4519 MSKAGPIVDMLPEKDADGGFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKISNIDGRSICLFGIFDGHGGSRAAEYLKERLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEEVIDEELELLVLASDGLWDVMPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHEKANPANSEESGPGSS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1481 297 ProSiteProfiles PPM-type phosphatase domain profile. 33 279 IPR001932 -
Prci2g1481 297 SMART PP2C_SIG_2 15 279 IPR001932 -
Prci2g1481 297 CDD PP2Cc 33 279 IPR001932 -
Prci2g1481 297 FunFam Probable protein phosphatase 2C 76 25 285 - -
Prci2g1481 297 PANTHER PROTEIN PHOSPHATASE 29 279 IPR015655 GO:0004722|GO:0006470
Prci2g1481 297 SMART PP2C_4 23 277 IPR001932 -
Prci2g1481 297 Gene3D - 24 294 IPR036457 -
Prci2g1481 297 ProSitePatterns PPM-type phosphatase domain signature. 64 72 IPR000222 GO:0043169
Prci2g1481 297 Pfam Protein phosphatase 2C 35 272 IPR001932 -
Prci2g1481 297 SUPERFAMILY PP2C-like 30 280 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1481 Prci-Chr2 11021474 11026822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1481 7 283 PP2C-type Phosphatase Gene Family AT5G53140 81.227 1.16e-172 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1481 K17506 - gmx:100805795 503.442