Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1480 ATGCTGACGGTGGGTTTGCCAGTGGAGGGTGGAAAAGATGGAAGACTTAGCTGTGGGTATTCAAGCTTTAGAGGAAAAAGGGTTACCATGGAGGATTTCTATGATATCAAGATATCCAATATTGATGGTCGATCCATATGCTTGTTCGGAATATTTGATGGTCATGGTGGTTCCCGTGCTGCTGAGTATTTGAAGGAGCGTCTCTTCAATAACCTCATGAAGCATCCGAAATTTTTGACTGATACCAAATTGGCTATAAGTGAAACTTATCAACAGACTGATGCTGATTTTCTGGATTCTGAGAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTCTATGTTGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCCATAGCACTCTCTGAGGATCATAAACCAAATAGATCTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTCATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTGGCAGAACCTGAGATCCAGGAAGAGGTAATAGATGAAGAGCTGGAGTTGCTGGTACTTGCAAGTGATGGACTATGGGATGTAATGCCGAATGATGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCCGAAGCAGCTGCTCGTAGGCTAACTGAAGCCGCCTTTAGTCGGGGCAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGAGAAAGCAAACCCAGCTAATTCTGAGGAATCAGGTCCAGGATCCAGCTAG 846 0.4527 MLTVGLPVEGGKDGRLSCGYSSFRGKRVTMEDFYDIKISNIDGRSICLFGIFDGHGGSRAAEYLKERLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEEVIDEELELLVLASDGLWDVMPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHEKANPANSEESGPGSS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1480 281 ProSiteProfiles PPM-type phosphatase domain profile. 17 263 IPR001932 -
Prci2g1480 281 SMART PP2C_4 7 261 IPR001932 -
Prci2g1480 281 FunFam Probable protein phosphatase 2C 76 10 269 - -
Prci2g1480 281 CDD PP2Cc 17 263 IPR001932 -
Prci2g1480 281 Gene3D - 10 278 IPR036457 -
Prci2g1480 281 SMART PP2C_SIG_2 15 263 IPR001932 -
Prci2g1480 281 SUPERFAMILY PP2C-like 14 264 IPR036457 -
Prci2g1480 281 PANTHER PROTEIN PHOSPHATASE 17 263 IPR015655 GO:0004722|GO:0006470
Prci2g1480 281 ProSitePatterns PPM-type phosphatase domain signature. 48 56 IPR000222 GO:0043169
Prci2g1480 281 Pfam Protein phosphatase 2C 19 256 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1480 Prci-Chr2 11021474 11026822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1480 13 267 PP2C-type Phosphatase Gene Family AT5G53140 83.137 1.32e-161 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1480 K17506 - gmx:100805795 454.907