Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1478 ATGCTGACGGTGGGTTTGCCAGTGGAGGGTGGAAAAGTTGCATTTTTTATCGGCAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGCTTTAGAGGAAAAAGGGTTACCATGGAGGATTTCTATGATATCAAGATATCCAATATTGATGGTCGATCCATATGCTTGTTCGGAATATTTGATGGTCATGGTGGTTCCCGTGCTGCTGAGTATTTGAAGGAGCGTCTCTTCAATAACCTCATGAAGCATCCGAAATTTTTGACTGATACCAAATTGGCTATAAGTGAAACTTATCAACAGACTGATGCTGATTTTCTGGATTCTGAGAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTCTATGTTGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCCATAGCACTCTCTGAGGATCATAAACCAAATAGATCTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTCATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTGGCAGAACCTGAGATCCAGGAAGAGGTAATAGATGAAGAGCTGGAGTTGCTGGTACTTGCAAGTGATGGACTATGGGATGTAATGCCGAATGATGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCCGAAGCAGCTGCTCGTAGGCTAACTGAAGCCGCCTTTAGTCGGGGCAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGAGAAAGCAAACCCAGCTAATTCTGAGGAATCAGGTCCAGGATCCAGCTAG 870 0.4506 MLTVGLPVEGGKVAFFIGSEDGRLSCGYSSFRGKRVTMEDFYDIKISNIDGRSICLFGIFDGHGGSRAAEYLKERLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEEVIDEELELLVLASDGLWDVMPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHEKANPANSEESGPGSS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1478 289 PANTHER PROTEIN PHOSPHATASE 25 271 IPR015655 GO:0004722|GO:0006470
Prci2g1478 289 ProSitePatterns PPM-type phosphatase domain signature. 56 64 IPR000222 GO:0043169
Prci2g1478 289 ProSiteProfiles PPM-type phosphatase domain profile. 25 271 IPR001932 -
Prci2g1478 289 CDD PP2Cc 25 271 IPR001932 -
Prci2g1478 289 Pfam Protein phosphatase 2C 27 264 IPR001932 -
Prci2g1478 289 SUPERFAMILY PP2C-like 18 272 IPR036457 -
Prci2g1478 289 Gene3D - 14 286 IPR036457 -
Prci2g1478 289 SMART PP2C_SIG_2 23 271 IPR001932 -
Prci2g1478 289 SMART PP2C_4 14 269 IPR001932 -
Prci2g1478 289 FunFam Probable protein phosphatase 2C 76 17 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1478 Prci-Chr2 11021474 11026823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1478 4 275 PP2C-type Phosphatase Gene Family AT5G53140 78.623 2.76e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1478 K17506 - cave:132179396 458.759