Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1477 ATGGTTTACAGCAGTTGTATAAGGTCTTTGGTTGTTCAAGTTGGATCCTTCACCAATAAAGTGCAATTCTACAACATTGTGAGAAGTTTGCATAAAGTTCCCTCCATTACTTATTCGTGGAATCGTGGATTTAAGACAAGCATAGGGATGATGGTTAATACAGGTGCCATGTCAAAAGCGGGACCCATTGTTGATATGTTGCCAGAGAAAGATGCTGACGGTGGGTTTGCCAGTGGAGGGTGGAAAAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGCTTTAGAGGAAAAAGGGTTACCATGGAGGATTTCTATGATATCAAGATATCCAATATTGATGGTCGATCCATATGCTTGTTCGGAATATTTGATGGTCATGGTGGTTCCCGTGCTGCTGAGTATTTGAAGGAGCGTCTCTTCAATAACCTCATGAAGCATCCGAAATTTTTGACTGATACCAAATTGGCTATAAGTGAAACTTATCAACAGACTGATGCTGATTTTCTGGATTCTGAGAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTCTATGTTGCCAATGTTGGAGATTCTAGGACTATAATATCAAAAGCTGGTAAAGCCATAGCACTCTCTGAGGATCATAAACCAAATAGATCTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTCATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTGGCAGAACCTGAGATCCAGGAAGAGGTAATAGATGAAGAGCTGGAGTTGCTGGTACTTGCAAGTGATGGACTATGGGATGTAATGCCGAATGATGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCCGAAGCAGCTGCTCGTAGGCTAACTGAAGCCGCCTTTAGTCGGGGCAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGAGAAAGCAAACCCAGCTAATTCTGAGGAATCAGGTCCAGGATCCAGCTAG 1062 0.4416 MVYSSCIRSLVVQVGSFTNKVQFYNIVRSLHKVPSITYSWNRGFKTSIGMMVNTGAMSKAGPIVDMLPEKDADGGFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKISNIDGRSICLFGIFDGHGGSRAAEYLKERLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEEVIDEELELLVLASDGLWDVMPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHEKANPANSEESGPGSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1477 353 CDD PP2Cc 89 335 IPR001932 -
Prci2g1477 353 Gene3D - 80 350 IPR036457 -
Prci2g1477 353 PANTHER PROTEIN PHOSPHATASE 78 335 IPR015655 GO:0004722|GO:0006470
Prci2g1477 353 SUPERFAMILY PP2C-like 86 336 IPR036457 -
Prci2g1477 353 Pfam Protein phosphatase 2C 91 328 IPR001932 -
Prci2g1477 353 FunFam Probable protein phosphatase 2C 76 81 341 - -
Prci2g1477 353 SMART PP2C_SIG_2 71 335 IPR001932 -
Prci2g1477 353 SMART PP2C_4 79 333 IPR001932 -
Prci2g1477 353 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Prci2g1477 353 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1477 Prci-Chr2 11021474 11026824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1477 1 339 PP2C-type Phosphatase Gene Family AT5G53140 71.225 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1477 K17506 - gmx:100805795 553.132