Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1469 ATGAAATACATGTTCCTTCTCATTGTCACGTTCAAGATTATCAAGAAGAAGTTAAGCAAGCTGCAAGGGGCAATGGGATTCCAAACACCCAATTCAAGCAAACCCAAACTGCAGCCGGTTACCAAACCCATTTTGTCCTACGATTCATGGATGGCGAGACATCCTTCAGCGTTGCGTTCATTTGATAGACTGATGAAAGCGGCAAGTGGGAAGGACATGGTTGTGTTTTTAGACTACGATGGCACCTTATCACCTATTGTGAATGACCCTGATTGTGCTTTTATGTCTGAGGAGATGCGTGCAGCAGTGTGCGAAGTTGCTAAAAATTTCCCGACAGCAATAATTAGTGGAAGAAGCAGAGACAAGGTTAAAGGATTTGTGAAGTTAAATAATGTGTATTATGCTGGAAGTCATGGGATGGATATTATGGCACCATCAATGCCAGCTAGATCCTCTGATGGCGACCACTATAACATGGCCCTCGACACCACGAAAGATAATGGAGTTCCCTTTCAACCTGCAAAGAAATTTTTGCCTGCAATTAGAGAGATATTGAAAGTATTAGAGAATGAAATAAAAGGCATACAAGGTGCAAGGATAGAGGACAATGGATTCTGCATTTCTGTACACTTCCGGCAAGTGCAAGAAAAGGACTACCTTGAATTAGAAGAGAAGGTGAAGTCTGTGCTCAAAAGACATCAAGACTTTAGCTTATCTGAGGGCAAAAAGGTTCTGGAAATAAGGCCATCCATAGAATGGAACAAAGGTCACGCCCTGGAATATTTTCTTGACACGCTAGGGTTAAGCAGTTCCAGCAATATCCTTCCAGTCTACATTGGTGATGATCGAACCGATGAAGATGCTTTTAAGGTGATACAGGAGAGAGGACAAGGTTATCCAATTATAGTATCTTCAATTCCAAAGGACACACGAGCTCTGTACTCTCTGAGAGATCCGTCAGAAGTGCTAATTTTTCTGTCACGTCTGGCGAAATGGAGGAAAACCATTATTGGCTCAAATTAG 1023 0.4213 MKYMFLLIVTFKIIKKKLSKLQGAMGFQTPNSSKPKLQPVTKPILSYDSWMARHPSALRSFDRLMKAASGKDMVVFLDYDGTLSPIVNDPDCAFMSEEMRAAVCEVAKNFPTAIISGRSRDKVKGFVKLNNVYYAGSHGMDIMAPSMPARSSDGDHYNMALDTTKDNGVPFQPAKKFLPAIREILKVLENEIKGIQGARIEDNGFCISVHFRQVQEKDYLELEEKVKSVLKRHQDFSLSEGKKVLEIRPSIEWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIQERGQGYPIIVSSIPKDTRALYSLRDPSEVLIFLSRLAKWRKTIIGSN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1469 340 CDD HAD_TPP 74 322 - -
Prci2g1469 340 Pfam Trehalose-phosphatase 76 320 IPR003337 GO:0003824|GO:0005992
Prci2g1469 340 NCBIfam trehalose-phosphatase 71 331 IPR003337 GO:0003824|GO:0005992
Prci2g1469 340 Coils Coil 212 232 - -
Prci2g1469 340 FunFam Trehalose 6-phosphate phosphatase 179 337 - -
Prci2g1469 340 NCBIfam HAD-IIB family hydrolase 75 295 IPR006379 -
Prci2g1469 340 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 28 335 IPR044651 GO:0004805|GO:0005992
Prci2g1469 340 Gene3D - 73 154 IPR023214 -
Prci2g1469 340 Gene3D - 171 337 IPR023214 -
Prci2g1469 340 SUPERFAMILY HAD-like 74 335 IPR036412 -
Prci2g1469 340 FunFam Trehalose 6-phosphate phosphatase 174 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1469 Prci-Chr2 10997741 11004689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1469 221 336 Trehalose Biosynthesis Gene Families AT4G17770 31.707 3.14e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1469 K01087 - gmx:100819120 493.812