Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1455 ATGGACAAGGTCAACATGAGAGAGTGGGAGAGCAAACTTATCAATGAACTGGTACAAGGTAGGGAGCTGGCAAGGCGACTCCAGATGTGCCTTCATGCGCCGTCTTCGCCCCAAGAAACCCAAGAGTTCTTGATCCAGAGAATCATAGCTGCATTTGAAAAGGCACTTGCAACGCTAAACTGGAACGGTGGGTCGTCGGTGGGAGAGGCATCACACGCCGTACAGGTTGGAATCCGAACTTGTGAGTCACCACCTTTGAGTGGAAGTCCTCGCAGCGAAGACTCTGAAAGGGATTTCCAAGATCAAAATGCCTCCAAAAAGAGAAGAAGCATGCCGAGGTGGACAAAACAGATCACAGTTAGCCCAGGGATGGGAGTGGAAGGGACTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAGAAAGAGATTCTGGGAGCCAAGTTTCCTAGAGGCTATTACAGATGCACCCATAGAAATGTTCAAGGATGCTTGGCCACGAAGCAAGTGCAAAGATCGGACGAAAACCCCAACGTATTCGAAATCACTTACAGAGGAAAGCACACCTGTGCACAGTCGTCCAATGTGGTCCCTCCATCTGGCACTCAAGAAAGCCTTGAACTGAATCCCAGCGCCGCAGATCCTCAGCAACAATCACAAGAACAGCTACTTCTGAACCTTCGAGCTGGGCTGAGGGTCCAAACCGAGAATCTAGATGTCCCCGATCCGGAGCAATCATCATTCACTTCCCTTATTTTTCCTTCAGCCTCCTCCATCATGAATAACGAAAACCAGATGTTTACAAGCTCCATGCTCGAAAACAATTTTGCCGAGAACGTTACTCCTGATCCTTCCTATATGTCCCCAGCCACATCAGGAATAACATACTACTCAGTGTCCCCAAGTGGAGTCAATAACGTGTTGGCTGAGATGCCAAGCATGGCAACTTCTGGGTCTGAGATCAACGACATAATCTCGGCCGTTACTTCGGCCGCAAACTCTCCCATAGTTGGTTTAGACCTTCCATTTGACCAGTCCGGATATGACGGACTCAACTTCACCTTTGATAACCAGCGATTCTTCTAA 1086 0.4843 MDKVNMREWESKLINELVQGRELARRLQMCLHAPSSPQETQEFLIQRIIAAFEKALATLNWNGGSSVGEASHAVQVGIRTCESPPLSGSPRSEDSERDFQDQNASKKRRSMPRWTKQITVSPGMGVEGTLDDGYSWRKYGQKEILGAKFPRGYYRCTHRNVQGCLATKQVQRSDENPNVFEITYRGKHTCAQSSNVVPPSGTQESLELNPSAADPQQQSQEQLLLNLRAGLRVQTENLDVPDPEQSSFTSLIFPSASSIMNNENQMFTSSMLENNFAENVTPDPSYMSPATSGITYYSVSPSGVNNVLAEMPSMATSGSEINDIISAVTSAANSPIVGLDLPFDQSGYDGLNFTFDNQRFF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1455 361 ProSiteProfiles WRKY domain profile. 125 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1455 361 Gene3D WRKY domain 123 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1455 361 MobiDBLite consensus disorder prediction 191 218 - -
Prci2g1455 361 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1455 361 SUPERFAMILY WRKY DNA-binding domain 129 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1455 361 FunFam WRKY transcription factor 53 116 193 - -
Prci2g1455 361 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1455 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 295 IPR044810 GO:0003700
Prci2g1455 361 MobiDBLite consensus disorder prediction 80 116 - -
Prci2g1455 361 MobiDBLite consensus disorder prediction 91 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1455 Prci-Chr2 10851954 10854801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1455 8 209 WRKY Transcription Factor Family AT5G24110 46.479 2.65e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g1455 WRKY 2.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1455 - - gmx:100776906 376.326