Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1448 ATGGAACAGAGTATCCTATGCAAATACACAGTCCACCAAAGTGTTACCAAGAAGTACACCAGGCCGTTGGCGGCCAGCAAAGCCTCTGACGCTCACACTCTCATAGAGCCCAGAGTGGTACGGATATCTGTAACCGATCCGGACGCCACTGACTCCTCCAGCGATGAGGAAGGAGGGTACTTCTTTGGCCGTCAGAGAGTGAAGCGTTATGTGAACCAGGTTAACATCGAAGCTAGCTGCAAGAGCGCGGTTGCCCCTAATCCGCGAAAGAGACCCGCCGGAGAAGCTTCTGCTTGCCGGCGGCCGGTGAAGGTTTCTTCTACAAATAACGGAAGGAAGTTCCGAGGAGTACGACAGAGACCTTGGGGGAAATGGGCGGCAGAGATTCGAGATCCCGCGCGTCGCGTACGCGTGTGGTTGGGAACCTTCGACACTGCGGAGGAAGCGGCTATGGTTTATGACAATGCCGCGATTAAGATTCGTGGACCGGACGCGTTGACAAACTTCGTGACCCCTCCGCCGAGGGAAAAGCCCGACGAAGCAGAGGTGGCGGTGAAGACGGAAATGAATGTGGTGGTGAAGTCAGAAGCGTCCGGCTCCGGCTACGATTCCGGCGACGAATCACACCGTCTACCATCTCCCACGTCAGTGCTGCAATTCAGAAGCAATTGCAGCGAAGAGACCGAGGCCCAGGGGGCAAGCGAACGGGAGAAAGAAAGCGAGGCGGAGGCGGCTGAAGGTGAAGACGTATCCCGGGAGTGTGAAGGCGAATCGAGCTTGTCGGATGAGAAGGAGGATTATTTCGGGTTCGACATGGCGAAGGAGGATTACTTCGGCTTCGATATGCCAGATTGGGAGCAGGTGTTCGATTTCTCAACGCCAGAACCGGAATACTCATTGCTGTTAGAAGAAGCTCCACCGTTTCTAGGGGAGACGACGGCAATGATAGCAGAGGAAGATTTCAAGGCGGACACCATGATAGTGGGGGGACCAGAGTTGGATTTGGATTTGGAGAAATCATTCTTGCCATCGACGTTATGCCAAATGGACGATTTCTTTCAAGACATATTGTCGGGTTCGGATCCTCTGGTGGTGCTCTGA 1101 0.5422 MEQSILCKYTVHQSVTKKYTRPLAASKASDAHTLIEPRVVRISVTDPDATDSSSDEEGGYFFGRQRVKRYVNQVNIEASCKSAVAPNPRKRPAGEASACRRPVKVSSTNNGRKFRGVRQRPWGKWAAEIRDPARRVRVWLGTFDTAEEAAMVYDNAAIKIRGPDALTNFVTPPPREKPDEAEVAVKTEMNVVVKSEASGSGYDSGDESHRLPSPTSVLQFRSNCSEETEAQGASEREKESEAEAAEGEDVSRECEGESSLSDEKEDYFGFDMAKEDYFGFDMPDWEQVFDFSTPEPEYSLLLEEAPPFLGETTAMIAEEDFKADTMIVGGPELDLDLEKSFLPSTLCQMDDFFQDILSGSDPLVVL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1448 366 MobiDBLite consensus disorder prediction 196 265 - -
Prci2g1448 366 SUPERFAMILY DNA-binding domain 113 170 IPR016177 GO:0003677
Prci2g1448 366 ProSiteProfiles AP2/ERF domain profile. 113 170 IPR001471 GO:0003700|GO:0006355
Prci2g1448 366 Gene3D AP2/ERF domain 112 171 IPR036955 GO:0003700|GO:0006355
Prci2g1448 366 SMART rav1_2 113 176 IPR001471 GO:0003700|GO:0006355
Prci2g1448 366 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
Prci2g1448 366 CDD AP2 113 169 IPR001471 GO:0003700|GO:0006355
Prci2g1448 366 MobiDBLite consensus disorder prediction 230 265 - -
Prci2g1448 366 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Prci2g1448 366 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Prci2g1448 366 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 37 260 - -
Prci2g1448 366 MobiDBLite consensus disorder prediction 84 115 - -
Prci2g1448 366 FunFam Ethylene-responsive transcription factor 2 112 171 - -
Prci2g1448 366 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1448 Prci-Chr2 10797146 10799043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1448 7 290 AP2-EREBP Transcription Factor Family AT4G27950 42.414 1.29e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci2g1448 AP2 4.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1448 - - pcin:129303306 723.391