Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1444 ATGGGCAAGAAAACGAGCCTCTTGATAACTTTGTCAGCAGCCTTCATCACTGGGGCAATTTTCGTGAGTGTTGGTGCTGAGCCAGTGGAAGATAAAAAAGCGTTGCTTGATTTTTATCGCAATATCGGTCACTCTCATCCTCTCAACTGGGATGAGAATTCTTCTGCATGCAAAAGCTGGAGAGGAGTGTTCTGCAACAGTAAACAATCCAGAGTCGTAGCCCTCCATTTACCAGGAGCTGGGTTGAGCGGTCCATTCCCATCTAATACTCTTGGTCGTCTTTCAGAACTACATACTTTGAGTCTTAGATCCAATAGAATAACGGGTCCTTTTCCTTCTGATTTCTCTGAGCTTAAAAATTTGAGTTATGTTTATCTCCAATTCAACAAGTTTTCCGGTCCACTGCCATCGGATTTTTCAGGTTGGAATAATCTTATTGTTATCAATCTATGCAATAATTCTTTTACTGGAAGCATCCCTTCGTCCATTTCAAAATTGACTCATCTCACATATTTAGTCCTAGCAAACAACTCGCTTTCAGGGGAAATTCCTGACCTCGATATCCCTAGCCTAAAAGAGCTAAATTTAGCCAACAACCACCTTAGTGGGGTTGTGCCTAAATCCCTTGAGAGATTTCCAGGTTCAGCTTTTGCTGGTAACGACAATCTTACAACAGAAAATGCAATTCCTCCGGCAATGCCACTTCAGCCGCCAAATGCTCCTCCGAGAATGAAAACCAAACTAAGTGAACCTGCATTATTGGCTATAATCATTGGTGGCTGTGTGCTATTATTTCTGGTGATTGCAGCTTTCTTGCTTATCCGCAGCTATCAGAAAGGAGATGAAGATTTGCCACCAGTGAAGTCAAAGAAAAAGGAAGAGTCTCTGAAAAAAGAAGCATCTGAAACTGAAAGTCAGGACAAGAACAAGATTGTGTTCTTTGAGGGTCGCAATCTTGCCTTTGACCTGGAAGACCTGTTGAGATCATCTGCCGAGGTACTAGGAAAAGGAACTTTCGGGACCACATACAAGGCTGCTCTAGATGATGTAACCACGGTGGTGGTGAAGAGATTGAAGGAAGTTGTGGTCGGAAAACGTGAGTTTGAACAGCAGATGGAGGTGGTGGGGAGGATTAGGCACGATAATGTGGTTCCATTAAGGGCATACTATTATTCCAAGGAAGAGAAACTTATGGTGTATGATCACTTCGAACAGGGTAGCGTTTCTGCAATGTTACATGGTAGGAAAGGGGAAGGCAGGGCTTCTTTAGACTGGGATAGCCGGCTGAGAATTGCGATCGGTGCAGCAAGAGGGATGGCTCATATCCACACACAACATGGAGGGAAACTAGTACATGGGAACCTAAAAGCCTCAAACGTCTTCTTAAACTCGCAAGGATATGGTTGTGTATCTGATGCAGGCTTGGCGACATTAACAAGTTCAATGGCCTTACCAGCACAGAGAACCGGAGGGTACCGTGCACCGGAAGTAACAGACATGAGAAAAGCGAGCCATGCGGCTGACATATACAGTTTTGGGGTGCTGGTGCTTGAGCTTCTGACCGGGAAATCACCCATACATGCCACAGGGAGTGAGGAGGCGGTGCACCTGGTTAGGTGGGTGAATTCAGTGGTGAGGGAGGAGTGGACGGCGGAGGTGTTTGACGTTGAGTTACTGAGATATTCGAATATTGAGGAAGAAATGGTAGATATGTTGCAGATAGGGATGGCATGCGCGGTGAGGGTGCCAGAACGGAGACCAAAAGTGCAACATGTTGTGAGGATGTTGGAGGAAGTTCGTAAAGTGAATACCGGGACCCAATCATCCACGGAAGCTTCCACACCGACCCCACAAGCAATTATTGACGTACCTTCTTCTTCCTCTGTTCGGCAATAA 1896 0.4552 MGKKTSLLITLSAAFITGAIFVSVGAEPVEDKKALLDFYRNIGHSHPLNWDENSSACKSWRGVFCNSKQSRVVALHLPGAGLSGPFPSNTLGRLSELHTLSLRSNRITGPFPSDFSELKNLSYVYLQFNKFSGPLPSDFSGWNNLIVINLCNNSFTGSIPSSISKLTHLTYLVLANNSLSGEIPDLDIPSLKELNLANNHLSGVVPKSLERFPGSAFAGNDNLTTENAIPPAMPLQPPNAPPRMKTKLSEPALLAIIIGGCVLLFLVIAAFLLIRSYQKGDEDLPPVKSKKKEESLKKEASETESQDKNKIVFFEGRNLAFDLEDLLRSSAEVLGKGTFGTTYKAALDDVTTVVVKRLKEVVVGKREFEQQMEVVGRIRHDNVVPLRAYYYSKEEKLMVYDHFEQGSVSAMLHGRKGEGRASLDWDSRLRIAIGAARGMAHIHTQHGGKLVHGNLKASNVFLNSQGYGCVSDAGLATLTSSMALPAQRTGGYRAPEVTDMRKASHAADIYSFGVLVLELLTGKSPIHATGSEEAVHLVRWVNSVVREEWTAEVFDVELLRYSNIEEEMVDMLQIGMACAVRVPERRPKVQHVVRMLEEVRKVNTGTQSSTEASTPTPQAIIDVPSSSSVRQ 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1444 631 MobiDBLite consensus disorder prediction 603 631 - -
Prci2g1444 631 Gene3D Transferase(Phosphotransferase) domain 1 403 619 - -
Prci2g1444 631 MobiDBLite consensus disorder prediction 283 303 - -
Prci2g1444 631 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 403 610 - -
Prci2g1444 631 Gene3D Phosphorylase Kinase; domain 1 293 402 - -
Prci2g1444 631 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Prci2g1444 631 FunFam pollen receptor-like kinase 1 297 402 - -
Prci2g1444 631 SUPERFAMILY L domain-like 43 211 - -
Prci2g1444 631 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Prci2g1444 631 SUPERFAMILY Protein kinase-like (PK-like) 331 597 IPR011009 -
Prci2g1444 631 ProSiteProfiles Protein kinase domain profile. 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1444 631 FunFam Probable inactive receptor kinase RLK902 28 187 - -
Prci2g1444 631 Pfam Leucine rich repeat 139 179 IPR001611 GO:0005515
Prci2g1444 631 Pfam Protein tyrosine and serine/threonine kinase 332 594 IPR001245 GO:0004672|GO:0006468
Prci2g1444 631 PANTHER OS05G0588300 PROTEIN 15 609 - -
Prci2g1444 631 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Prci2g1444 631 Gene3D Ribonuclease Inhibitor 29 225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1444 Prci-Chr2 10758643 10762170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1444 20 611 Receptor kinase-like Gene Family AT4G23740 53.355 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci2g1444 PK_Tyr_Ser-Thr 1.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1444 - - aprc:113851984 845.884