Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1432 ATGTCAAGCAATGCAATAACTCTCTTTATCATGTTTCTTAATATCCCCTTGTTTCCATCCGTCTATACTCTGAACCAGGAAGGTCTCTCCCTACTTTCATGGCTTTCAACATTCAGTTCCTCTGATTCTGCTACTTCATTCTCTTCATGGAATCCAACCGACAAAAGTCCTTGCAAATGGGATTATATAAAATGTTCCAAAGATGGGTTTGTTTCAGATATCGTAATAACATCTGTCAATCTTCGTAGCAGCTTCCCAAAGCAACTCCTCTCTTTTGGCCACCTCACTGCTCTTGTCATCTCAAATGGAAATCTGACTGGTGAGATTCCAAGTTCAGTAGGGAACTTGTCGTCTCTGGTTTCTTTGGACCTCAGCTTCAATGCTTTAACAGGAACCATTCCTGCAGAAATAGGAAAGTTACCTAATCTGCAGTGGTTAAAATTAAATTCAAATTCCTTACATGGTGAAATTCCAACAGAAATTGGGAACTGTTCCAAGCTTCGTCTGCTGGAACTGTATGATAACCAGCTCTCCGGCAAGATTCCTAGAGAGATAGGCCATTTGAAGGATCTAGAAATGTTTCGAGCAGGTGGAAATCAGGGAATCCATGGAGAGATTCCAATGCAGATTTCAAACTGCAAAGCTCTCACTTTTCTGGGTCTTGCAGATACTGGGATTTCAGGGGAGATTCCATCAAGTATAGGAGAACTTAAGAATCTCAAGACGCTTTCTGTCTACACAGCAAACCTCACAGGTCACATCCCACCAGAGGTTCATAATTGCTCAGCCTTGGAAAATTTGTTTCTATATGAAAATCAGCTTTCTGGTAACATTCCTTATGAATTGGGTTTCATGAAAAGCCTAAGGAGAGTAATGCTATGGCAGAACAATTTAACTGGCACCGTTCCAGAAAGTCTGGGGAACTGTACAAGTCTGATGGTTGTGGATTTTTCTTTGAATTCCTTGGAAGGTGAGCTCCCTGTGACTCTTAGAAATTTGCTCTTATTGGAGGGGCTTCTTCTCTCTGATAATAACATTTCTGGAGAAATACCTTCCTTTATTGGCAATTTTTCCAGACTGAAGCAGCTTGAATTAGATAACAACAGATTCTCTGGAGAGATTCCACCTGTCATGGGACAACTGAAAGAACTCACCTTGTTCTTTGCTTGGCAGAACCAACTATATGGAAGCATACCAACAGAACTATCCAACTGTGAGAAACTTGAGGCACTTGATCTCTCACACAATTTCCTCACTGGGTCAATTCCAAGTTCTCTTTTTCATCTAGAGAACTTAACTCAACTCTTGCTGATATCAAATCGACTTTCAGGTCAACTTCCACCAGATATTGGCAGCTGCACCAACTTGGTCAGGCTACGGCTAGGATCAAACAGCCTTAGTGGTTCAATTCCACCAGAAATAGGTCTTTTAAGCAGATTGAGCTTTCTCGAATTGTCAGATAATCTACTCAATGGAGAAATTCCCGGCCAAATTGGCAACTGCAATCAGCTAGAAATGCTTGACTTGCACAGGAATCAGTTGCAAGGAACAATTCCTTCCTCTTTCGAATTCCTAGTTGTTCTTAATGTCTTAGATCTTTCTACGAACAGAATAAGTGGAAGTATTCCCCAAAATTTGGGCAAGCTTACATCTTTAAATAAGTTAATAATCAGTGGCAACGGCATTACAGGTCTCATCCCTCAATCAATGGGCCTTTGTACGAATTTGCAGTTGCTGGATATTAGCAACAACAGAATCTCTGGTTCCATCCCAGATGAGATTGGCCAATTGCAAGGACTCGATATCCTCTTGAACTTGAGTTGGAACTCTCTAACAGGTCCCATTCCAGAGAGCTTCTCAAATCTCTCAAAACTTTCCAACTTGGACCTCTCCCACAACAAGCTAACAGGCAGCCTCAGAATACTGGGTAGTCTTGACAATTTAGTGTCTTTGAATGTCTCCTACAATAGTTTTTATGGTTCACTTCCAGATACGAAGTTCTTTCATGATCTCCCTGCTGCTGCATTTGTAGGTAACCCTGAGCTCTGCATTAACAACTGTGAAATGAATCGAAATCACCAAAGCATCAAGTCAGTAAGAAATGTTATCATTTACACTTTTCTTGGTGTTATTTTAACAGCTATGTTTGTGACTTTTGGAGTAATTTTTGCCCTGAGAATTCACGGGGCCACATTTGAGAGGAGATTTGATGAAGAAAGTGAAATGGAATGGACTTTTACTCCATTTCAAAAACTTAACTTCTCCATTAATGACATTGTCACAAAGTTATCAGATTCAAACGTTGTTGGAAAGGGTTGCTCAGGGATTGTTTATCGAGTAGAGACTCCAATGAAACAGATAATTGCAGTGAAGAAGCTGTGGCCAGTAAAGAATGACGAGCCACCAGAGAGAGATTTGTTTTCTGCAGAAGTTCAGACGTTGGGATCAATAAGACATAAAAATATAGTCAGGCTTCTCGGATGCTGTAACAATGGAAGAACGAGATTACTTCTATTTGATTATATCAGCAATGGGAGTTTGTGCGGGTTGCTCCATGAAAAGAGGTTGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTGGGAGCAGCTCAAGGTTTAGAATATCTGCATCATGATTGTATACCTCCAATAGTCCATAGGGACATTAAGGCTAACAACATCTTGGTAGGACCACAATTTGAAGCTTTTATTGCAGATTTTGGTCTTGCAAAATTGGTGAATTCCTCCGAGTGTTCAAAAGCCTCTGCCATAGTTGCAGGCTCTTATGGGTACATAGCTCCCGAATATGGATACAGCCTAAGGATCACAGAGAAAAGTGATGTGTATAGTTATGGTGTGGTGCTGCTGGAGGTGTTAACGGGGATGGAGCCAACTGATAATAGGATTCCAGAGGGTGCCCACATTGTCAGTTGGGTTAGCAGGGAAATCAGAGAGAAGAAAAGGGAATTCACCTCAATTCTTGACCAGCAACTAGTATTGCAATGTGGTACTAGAACGCCAGAGATGCTTCAAGTGCTAGGGGTGGCTCTCTTATGTGTAAATCCATCCCCAGAGGAACGACCCACCATGAAAGATGTAACAGCAATGCTCAAGGAGATCAGGCATGAAACTGACATTTTCGAGAAACCAAGTTTTCTCCAAAAAGGAGAAGTCACCAATCCAAAAGTGGCAGTTCACTGTTCAAGTTTCTCCAGATCATGTGAACCACTAATAGAATCCTCCTCCTCGTCATCTTCTTCCTAA 3267 0.4126 MSSNAITLFIMFLNIPLFPSVYTLNQEGLSLLSWLSTFSSSDSATSFSSWNPTDKSPCKWDYIKCSKDGFVSDIVITSVNLRSSFPKQLLSFGHLTALVISNGNLTGEIPSSVGNLSSLVSLDLSFNALTGTIPAEIGKLPNLQWLKLNSNSLHGEIPTEIGNCSKLRLLELYDNQLSGKIPREIGHLKDLEMFRAGGNQGIHGEIPMQISNCKALTFLGLADTGISGEIPSSIGELKNLKTLSVYTANLTGHIPPEVHNCSALENLFLYENQLSGNIPYELGFMKSLRRVMLWQNNLTGTVPESLGNCTSLMVVDFSLNSLEGELPVTLRNLLLLEGLLLSDNNISGEIPSFIGNFSRLKQLELDNNRFSGEIPPVMGQLKELTLFFAWQNQLYGSIPTELSNCEKLEALDLSHNFLTGSIPSSLFHLENLTQLLLISNRLSGQLPPDIGSCTNLVRLRLGSNSLSGSIPPEIGLLSRLSFLELSDNLLNGEIPGQIGNCNQLEMLDLHRNQLQGTIPSSFEFLVVLNVLDLSTNRISGSIPQNLGKLTSLNKLIISGNGITGLIPQSMGLCTNLQLLDISNNRISGSIPDEIGQLQGLDILLNLSWNSLTGPIPESFSNLSKLSNLDLSHNKLTGSLRILGSLDNLVSLNVSYNSFYGSLPDTKFFHDLPAAAFVGNPELCINNCEMNRNHQSIKSVRNVIIYTFLGVILTAMFVTFGVIFALRIHGATFERRFDEESEMEWTFTPFQKLNFSINDIVTKLSDSNVVGKGCSGIVYRVETPMKQIIAVKKLWPVKNDEPPERDLFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLCGLLHEKRLFLDWDARYKIILGAAQGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFIADFGLAKLVNSSECSKASAIVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLEVLTGMEPTDNRIPEGAHIVSWVSREIREKKREFTSILDQQLVLQCGTRTPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHETDIFEKPSFLQKGEVTNPKVAVHCSSFSRSCEPLIESSSSSSSS 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1432 1088 SUPERFAMILY L domain-like 37 393 - -
Prci2g1432 1088 Gene3D Ribonuclease Inhibitor 520 603 IPR032675 -
Prci2g1432 1088 ProSitePatterns Protein kinases ATP-binding region signature. 769 797 IPR017441 GO:0005524
Prci2g1432 1088 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Prci2g1432 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 842 1056 - -
Prci2g1432 1088 Pfam Protein kinase domain 766 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1432 1088 SUPERFAMILY Protein kinase-like (PK-like) 745 1046 IPR011009 -
Prci2g1432 1088 ProSiteProfiles Leucine-rich repeat profile. 407 429 IPR001611 GO:0005515
Prci2g1432 1088 PRINTS Leucine-rich repeat signature 119 132 - -
Prci2g1432 1088 PRINTS Leucine-rich repeat signature 622 635 - -
Prci2g1432 1088 Gene3D Transferase(Phosphotransferase) domain 1 842 1056 - -
Prci2g1432 1088 SUPERFAMILY RNI-like 293 661 - -
Prci2g1432 1088 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Prci2g1432 1088 SMART serkin_6 763 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1432 1088 Gene3D Phosphorylase Kinase; domain 1 728 841 - -
Prci2g1432 1088 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Prci2g1432 1088 Gene3D Ribonuclease Inhibitor 325 421 IPR032675 -
Prci2g1432 1088 Gene3D Ribonuclease Inhibitor 182 324 IPR032675 -
Prci2g1432 1088 Gene3D Ribonuclease Inhibitor 604 691 IPR032675 -
Prci2g1432 1088 Gene3D Ribonuclease Inhibitor 422 519 IPR032675 -
Prci2g1432 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 200 325 - -
Prci2g1432 1088 SMART LRR_typ_2 140 164 IPR003591 -
Prci2g1432 1088 SMART LRR_typ_2 285 309 IPR003591 -
Prci2g1432 1088 SMART LRR_typ_2 622 644 IPR003591 -
Prci2g1432 1088 SMART LRR_typ_2 357 381 IPR003591 -
Prci2g1432 1088 SMART LRR_typ_2 116 139 IPR003591 -
Prci2g1432 1088 SMART LRR_typ_2 573 597 IPR003591 -
Prci2g1432 1088 SMART LRR_typ_2 477 501 IPR003591 -
Prci2g1432 1088 SMART LRR_typ_2 525 549 IPR003591 -
Prci2g1432 1088 SMART LRR_typ_2 645 678 IPR003591 -
Prci2g1432 1088 SMART LRR_typ_2 429 453 IPR003591 -
Prci2g1432 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 407 692 - -
Prci2g1432 1088 ProSiteProfiles Protein kinase domain profile. 763 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1432 1088 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 431 1039 - -
Prci2g1432 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 739 841 - -
Prci2g1432 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 24 199 - -
Prci2g1432 1088 ProSiteProfiles Leucine-rich repeat profile. 624 646 IPR001611 GO:0005515
Prci2g1432 1088 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Prci2g1432 1088 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Prci2g1432 1088 Pfam Leucine Rich Repeat 604 622 IPR001611 GO:0005515
Prci2g1432 1088 Pfam Leucine Rich Repeat 407 429 IPR001611 GO:0005515
Prci2g1432 1088 Pfam Leucine Rich Repeat 575 595 IPR001611 GO:0005515
Prci2g1432 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1432 Prci-Chr2 10694828 10699278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1432 22 1057 Receptor kinase-like Gene Family AT5G56040 47.204 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci2g1432 Pkinase 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1432 - - gmx:100807225 1708.73