Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1431 ATGTCAAGCAATGCAATAACTCTCTTTATCATGTTTCTTAATATCCCCTTGTTTCCATCCGTCTATACTCTGAACCAGGAAGGTCTCTCCCTACTTTCATGGCTTTCAACATTCAGTTCCTCTGATTCTGCTACTTCATTCTCTTCATGGAATCCAACCGACAAAAGTCCTTGCAAATGGGATTATATAAAATGTTCCAAAGATGGGTTTGTTTCAGATATCGTAATAACATCTGTCAATCTTCGTAGCAGCTTCCCAAAGCAACTCCTCTCTTTTGGCCACCTCACTGCTCTTGTCATCTCAAATGGAAATCTGACTGGTGAGATTCCAAGTTCAGTAGGGAACTTGTCGTCTCTGGTTTCTTTGGACCTCAGCTTCAATGCTTTAACAGGAACCATTCCTGCAGAAATAGGAAAGTTACCTAATCTGCAGTGGTTAAAATTAAATTCAAATTCCTTACATGGTGAAATTCCAACAGAAATTGGGAACTGTTCCAAGCTTCGTCTGCTGGAACTGTATGATAACCAGCTCTCCGGCAAGATTCCTAGAGAGATAGGCCATTTGAAGGATCTAGAAATGTTTCGAGCAGGTGGAAATCAGGGAATCCATGGAGAGATTCCAATGCAGATTTCAAACTGCAAAGCTCTCACTTTTCTGGGTCTTGCAGATACTGGGATTTCAGGGGAGATTCCATCAAGTATAGGAGAACTTAAGAATCTCAAGACGCTTTCTGTCTACACAGCAAACCTCACAGGTCACATCCCACCAGAGGTTCATAATTGCTCAGCCTTGGAAAATTTGTTTCTATATGAAAATCAGCTTTCTGGTAACATTCCTTATGAATTGGGTTTCATGAAAAGCCTAAGGAGAGTAATGCTATGGCAGAACAATTTAACTGGCACCGTTCCAGAAAGTCTGGGGAACTGTACAAGTCTGATGGTTGTGGATTTTTCTTTGAATTCCTTGGAAGGTGAGCTCCCTGTGACTCTTAGAAATTTGCTCTTATTGGAGGGGCTTCTTCTCTCTGATAATAACATTTCTGGAGAAATACCTTCCTTTATTGGCAATTTTTCCAGACTGAAGCAGCTTGAATTAGATAACAACAGATTCTCTGGAGAGATTCCACCTGTCATGGGACAACTGAAAGAACTCACCTTGTTCTTTGCTTGGCAGAACCAACTATATGGAAGCATACCAACAGAACTATCCAACTGTGAGAAACTTGAGGCACTTGATCTCTCACACAATTTCCTCACTGGGTCAATTCCAAGTTCTCTTTTTCATCTAGAGAACTTAACTCAACTCTTGCTGATATCAAATCGACTTTCAGGTCAACTTCCACCAGATATTGGCAGCTGCACCAACTTGGTCAGGCTACGGCTAGGATCAAACAGCCTTAGTGGTTCAATTCCACCAGAAATAGGTCTTTTAAGCAGATTGAGCTTTCTCGAATTGTCAGATAATCTACTCAATGGAGAAATTCCCGGCCAAATTGGCAACTGCAATCAGCTAGAAATGCTTGACTTGCACAGGAATCAGTTGCAAGGAACAATTCCTTCCTCTTTCGAATTCCTAGTTGTTCTTAATGTCTTAGATCTTTCTACGAACAGAATAAGTGGAAGTATTCCCCAAAATTTGGGCAAGCTTACATCTTTAAATAAGTTAATAATCAGTGGCAACGGCATTACAGGTCTCATCCCTCAATCAATGGGCCTTTGTACGAATTTGCAGTTGCTGGATATTAGCAACAACAGAATCTCTGGTTCCATCCCAGATGAGATTGGCCAATTGCAAGGACTCGATATCCTCTTGAACTTGAGTTGGAACTCTCTAACAGGTCCCATTCCAGAGAGCTTCTCAAATCTCTCAAAACTTTCCAACTTGGACCTCTCCCACAACAAGCTAACAGGCAGCCTCAGAATACTGGGTAACCCTGAGCTCTGCATTAACAACTGTGAAATGAATCGAAATCACCAAAGCATCAAGTCAGTAAGAAATGTTATCATTTACACTTTTCTTGGTGTTATTTTAACAGCTATGTTTGTGACTTTTGGAGTAATTTTTGCCCTGAGAATTCACGGGGCCACATTTGAGAGGAGATTTGATGAAGAAAGTGAAATGGAATGGACTTTTACTCCATTTCAAAAACTTAACTTCTCCATTAATGACATTGTCACAAAGTTATCAGATTCAAACGTTGTTGGAAAGGGTTGCTCAGGGATTGTTTATCGAGTAGAGACTCCAATGAAACAGATAATTGCAGTGAAGAAGCTGTGGCCAGTAAAGAATGACGAGCCACCAGAGAGAGATTTGTTTTCTGCAGAAGTTCAGACGTTGGGATCAATAAGACATAAAAATATAGTCAGGCTTCTCGGATGCTGTAACAATGGAAGAACGAGATTACTTCTATTTGATTATATCAGCAATGGGAGTTTGTGCGGGTTGCTCCATGAAAAGAGGTTGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTGGGAGCAGCTCAAGGTTTAGAATATCTGCATCATGATTGTATACCTCCAATAGTCCATAGGGACATTAAGGCTAACAACATCTTGGTAGGACCACAATTTGAAGCTTTTATTGCAGATTTTGGTCTTGCAAAATTGGTGAATTCCTCCGAGTGTTCAAAAGCCTCTGCCATAGTTGCAGGCTCTTATGGGTACATAGCTCCCGAATATGGATACAGCCTAAGGATCACAGAGAAAAGTGATGTGTATAGTTATGGTGTGGTGCTGCTGGAGGTGTTAACGGGGATGGAGCCAACTGATAATAGGATTCCAGAGGGTGCCCACATTGTCAGTTGGGTTAGCAGGGAAATCAGAGAGAAGAAAAGGGAATTCACCTCAATTCTTGACCAGCAACTAGTATTGCAATGTGGTACTAGAACGCCAGAGATGCTTCAAGTGCTAGGGGTGGCTCTCTTATGTGTAAATCCATCCCCAGAGGAACGACCCACCATGAAAGATGTAACAGCAATGCTCAAGGAGATCAGGCATGAAACTGACATTTTCGAGAAACCAAGTTTTCTCCAAAAAGGAGAAGTCACCAATCCAAAAGTGGCAGTTCACTGTTCAAGTTTCTCCAGATCATGTGAACCACTAATAGAATCCTCCTCCTCGTCATCTTCTTCCTAA 3162 0.4137 MSSNAITLFIMFLNIPLFPSVYTLNQEGLSLLSWLSTFSSSDSATSFSSWNPTDKSPCKWDYIKCSKDGFVSDIVITSVNLRSSFPKQLLSFGHLTALVISNGNLTGEIPSSVGNLSSLVSLDLSFNALTGTIPAEIGKLPNLQWLKLNSNSLHGEIPTEIGNCSKLRLLELYDNQLSGKIPREIGHLKDLEMFRAGGNQGIHGEIPMQISNCKALTFLGLADTGISGEIPSSIGELKNLKTLSVYTANLTGHIPPEVHNCSALENLFLYENQLSGNIPYELGFMKSLRRVMLWQNNLTGTVPESLGNCTSLMVVDFSLNSLEGELPVTLRNLLLLEGLLLSDNNISGEIPSFIGNFSRLKQLELDNNRFSGEIPPVMGQLKELTLFFAWQNQLYGSIPTELSNCEKLEALDLSHNFLTGSIPSSLFHLENLTQLLLISNRLSGQLPPDIGSCTNLVRLRLGSNSLSGSIPPEIGLLSRLSFLELSDNLLNGEIPGQIGNCNQLEMLDLHRNQLQGTIPSSFEFLVVLNVLDLSTNRISGSIPQNLGKLTSLNKLIISGNGITGLIPQSMGLCTNLQLLDISNNRISGSIPDEIGQLQGLDILLNLSWNSLTGPIPESFSNLSKLSNLDLSHNKLTGSLRILGNPELCINNCEMNRNHQSIKSVRNVIIYTFLGVILTAMFVTFGVIFALRIHGATFERRFDEESEMEWTFTPFQKLNFSINDIVTKLSDSNVVGKGCSGIVYRVETPMKQIIAVKKLWPVKNDEPPERDLFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLCGLLHEKRLFLDWDARYKIILGAAQGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFIADFGLAKLVNSSECSKASAIVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLEVLTGMEPTDNRIPEGAHIVSWVSREIREKKREFTSILDQQLVLQCGTRTPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHETDIFEKPSFLQKGEVTNPKVAVHCSSFSRSCEPLIESSSSSSSS 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1431 1053 SUPERFAMILY RNI-like 316 666 - -
Prci2g1431 1053 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 807 1021 - -
Prci2g1431 1053 Gene3D Phosphorylase Kinase; domain 1 693 806 - -
Prci2g1431 1053 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Prci2g1431 1053 Pfam Leucine Rich Repeat 407 429 IPR001611 GO:0005515
Prci2g1431 1053 SMART LRR_typ_2 140 164 IPR003591 -
Prci2g1431 1053 SMART LRR_typ_2 285 309 IPR003591 -
Prci2g1431 1053 SMART LRR_typ_2 357 381 IPR003591 -
Prci2g1431 1053 SMART LRR_typ_2 116 139 IPR003591 -
Prci2g1431 1053 SMART LRR_typ_2 573 597 IPR003591 -
Prci2g1431 1053 SMART LRR_typ_2 477 501 IPR003591 -
Prci2g1431 1053 SMART LRR_typ_2 525 549 IPR003591 -
Prci2g1431 1053 SMART LRR_typ_2 622 645 IPR003591 -
Prci2g1431 1053 SMART LRR_typ_2 429 453 IPR003591 -
Prci2g1431 1053 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 24 199 - -
Prci2g1431 1053 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 704 806 - -
Prci2g1431 1053 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Prci2g1431 1053 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 200 423 - -
Prci2g1431 1053 PANTHER RECEPTOR-LIKE PROTEIN 55 419 1008 - -
Prci2g1431 1053 ProSiteProfiles Leucine-rich repeat profile. 407 429 IPR001611 GO:0005515
Prci2g1431 1053 Gene3D Ribonuclease Inhibitor 238 386 IPR032675 -
Prci2g1431 1053 Gene3D Ribonuclease Inhibitor 387 659 IPR032675 -
Prci2g1431 1053 Gene3D Ribonuclease Inhibitor 29 138 IPR032675 -
Prci2g1431 1053 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Prci2g1431 1053 ProSiteProfiles Protein kinase domain profile. 728 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1431 1053 Pfam Protein kinase domain 731 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1431 1053 PRINTS Leucine-rich repeat signature 622 635 - -
Prci2g1431 1053 PRINTS Leucine-rich repeat signature 119 132 - -
Prci2g1431 1053 Gene3D Ribonuclease Inhibitor 139 233 IPR032675 -
Prci2g1431 1053 Gene3D Transferase(Phosphotransferase) domain 1 807 1021 - -
Prci2g1431 1053 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Prci2g1431 1053 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Prci2g1431 1053 Pfam Leucine rich repeat 574 635 IPR001611 GO:0005515
Prci2g1431 1053 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 430 658 - -
Prci2g1431 1053 ProSitePatterns Protein kinases ATP-binding region signature. 734 762 IPR017441 GO:0005524
Prci2g1431 1053 SUPERFAMILY Protein kinase-like (PK-like) 710 1011 IPR011009 -
Prci2g1431 1053 SUPERFAMILY L domain-like 37 394 - -
Prci2g1431 1053 SMART serkin_6 728 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1431 Prci-Chr2 10694828 10699279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1431 22 1022 Receptor kinase-like Gene Family AT5G56040 45.498 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci2g1431 Pkinase 9.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1431 - - gmx:100780101 1628.99