Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1430 ATGTCAAGCAATGCAATAACTCTCTTTATCATGTTTCTTAATATCCCCTTGTTTCCATCCGTCTATACTCTGAACCAGGAAGGTCTCTCCCTACTTTCATGGCTTTCAACATTCAGTTCCTCTGATTCTGCTACTTCATTCTCTTCATGGAATCCAACCGACAAAAGTCCTTGCAAATGGGATTATATAAAATGTTCCAAAGATGGGTTTGTTTCAGATATCGTAATAACATCTGTCAATCTTCGTAGCAGCTTCCCAAAGCAACTCCTCTCTTTTGGCCACCTCACTGCTCTTGTCATCTCAAATGGAAATCTGACTGGTGAGATTCCAAGTTCAGTAGGGAACTTGTCGTCTCTGGTTTCTTTGGACCTCAGCTTCAATGCTTTAACAGGAACCATTCCTGCAGAAATAGGAAAGTTACCTAATCTGCAGTGGTTAAAATTAAATTCAAATTCCTTACATGGTGAAATTCCAACAGAAATTGGGAACTGTTCCAAGCTTCGTCTGCTGGAACTGTATGATAACCAGCTCTCCGGCAAGATTCCTAGAGAGATAGGCCATTTGAAGGATCTAGAAATGTTTCGAGCAGGTGGAAATCAGGGAATCCATGGAGAGATTCCAATGCAGATTTCAAACTGCAAAGCTCTCACTTTTCTGGGTCTTGCAGATACTGGGATTTCAGGGGAGATTCCATCAAGTATAGGAGAACTTAAGAATCTCAAGACGCTTTCTGTCTACACAGCAAACCTCACAGGTCACATCCCACCAGAGGTTCATAATTGCTCAGCCTTGGAAAATTTGTTTCTATATGAAAATCAGCTTTCTGGTAACATTCCTTATGAATTGGGTTTCATGAAAAGCCTAAGGAGAGTAATGCTATGGCAGAACAATTTAACTGGCACCGTTCCAGAAAGTCTGGGGAACTGTACAAGTCTGATGGTTGTGGATTTTTCTTTGAATTCCTTGGAAGGTGAGCTCCCTGTGACTCTTAGAAATTTGCTCTTATTGGAGGGGCTTCTTCTCTCTGATAATAACATTTCTGGAGAAATACCTTCCTTTATTGGCAATTTTTCCAGACTGAAGCAGCTTGAATTAGATAACAACAGATTCTCTGGAGAGATTCCACCTGTCATGGGACAACTGAAAGAACTCACCTTGTTCTTTGCTTGGCAGAACCAACTATATGGAAGCATACCAACAGAACTATCCAACTGTCAACTTCCACCAGATATTGGCAGCTGCACCAACTTGGTCAGGCTACGGCTAGGATCAAACAGCCTTAGTGGTTCAATTCCACCAGAAATAGGTCTTTTAAGCAGATTGAGCTTTCTCGAATTGTCAGATAATCTACTCAATGGAGAAATTCCCGGCCAAATTGGCAACTGCAATCAGCTAGAAATGCTTGACTTGCACAGGAATCAGTTGCAAGGAACAATTCCTTCCTCTTTCGAATTCCTAGTTGTTCTTAATGTCTTAGATCTTTCTACGAACAGAATAAGTGGAAGTATTCCCCAAAATTTGGGCAAGCTTACATCTTTAAATAAGTTAATAATCAGTGGCAACGGCATTACAGGTCTCATCCCTCAATCAATGGGCCTTTGTACGAATTTGCAGTTGCTGGATATTAGCAACAACAGAATCTCTGGTTCCATCCCAGATGAGATTGGCCAATTGCAAGGACTCGATATCCTCTTGAACTTGAGTTGGAACTCTCTAACAGGTCCCATTCCAGAGAGCTTCTCAAATCTCTCAAAACTTTCCAACTTGGACCTCTCCCACAACAAGCTAACAGGCAGCCTCAGAATACTGGGTAGTCTTGACAATTTAGTGTCTTTGAATGTCTCCTACAATAGTTTTTATGGTTCACTTCCAGATACGAAGTTCTTTCATGATCTCCCTGCTGCTGCATTTGTAGGTAACCCTGAGCTCTGCATTAACAACTGTGAAATGAATCGAAATCACCAAAGCATCAAGTCAGTAAGAAATGTTATCATTTACACTTTTCTTGGTGTTATTTTAACAGCTATGTTTGTGACTTTTGGAGTAATTTTTGCCCTGAGAATTCACGGGGCCACATTTGAGAGGAGATTTGATGAAGAAAGTGAAATGGAATGGACTTTTACTCCATTTCAAAAACTTAACTTCTCCATTAATGACATTGTCACAAAGTTATCAGATTCAAACGTTGTTGGAAAGGGTTGCTCAGGGATTGTTTATCGAGTAGAGACTCCAATGAAACAGATAATTGCAGTGAAGAAGCTGTGGCCAGTAAAGAATGACGAGCCACCAGAGAGAGATTTGTTTTCTGCAGAAGTTCAGACGTTGGGATCAATAAGACATAAAAATATAGTCAGGCTTCTCGGATGCTGTAACAATGGAAGAACGAGATTACTTCTATTTGATTATATCAGCAATGGGAGTTTGTGCGGGTTGCTCCATGAAAAGAGGTTGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTGGGAGCAGCTCAAGGTTTAGAATATCTGCATCATGATTGTATACCTCCAATAGTCCATAGGGACATTAAGGCTAACAACATCTTGGTAGGACCACAATTTGAAGCTTTTATTGCAGATTTTGGTCTTGCAAAATTGGTGAATTCCTCCGAGTGTTCAAAAGCCTCTGCCATAGTTGCAGGCTCTTATGGGTACATAGCTCCCGAATATGGATACAGCCTAAGGATCACAGAGAAAAGTGATGTGTATAGTTATGGTGTGGTGCTGCTGGAGGTGTTAACGGGGATGGAGCCAACTGATAATAGGATTCCAGAGGGTGCCCACATTGTCAGTTGGGTTAGCAGGGAAATCAGAGAGAAGAAAAGGGAATTCACCTCAATTCTTGACCAGCAACTAGTATTGCAATGTGGTACTAGAACGCCAGAGATGCTTCAAGTGCTAGGGGTGGCTCTCTTATGTGTAAATCCATCCCCAGAGGAACGACCCACCATGAAAGATGTAACAGCAATGCTCAAGGAGATCAGGCATGAAACTGACATTTTCGAGAAACCAAGTTTTCTCCAAAAAGGAGAAGTCACCAATCCAAAAGTGGCAGTTCACTGTTCAAGTTTCTCCAGATCATGTGAACCACTAATAGAATCCTCCTCCTCGTCATCTTCTTCCTAA 3150 0.4133 MSSNAITLFIMFLNIPLFPSVYTLNQEGLSLLSWLSTFSSSDSATSFSSWNPTDKSPCKWDYIKCSKDGFVSDIVITSVNLRSSFPKQLLSFGHLTALVISNGNLTGEIPSSVGNLSSLVSLDLSFNALTGTIPAEIGKLPNLQWLKLNSNSLHGEIPTEIGNCSKLRLLELYDNQLSGKIPREIGHLKDLEMFRAGGNQGIHGEIPMQISNCKALTFLGLADTGISGEIPSSIGELKNLKTLSVYTANLTGHIPPEVHNCSALENLFLYENQLSGNIPYELGFMKSLRRVMLWQNNLTGTVPESLGNCTSLMVVDFSLNSLEGELPVTLRNLLLLEGLLLSDNNISGEIPSFIGNFSRLKQLELDNNRFSGEIPPVMGQLKELTLFFAWQNQLYGSIPTELSNCQLPPDIGSCTNLVRLRLGSNSLSGSIPPEIGLLSRLSFLELSDNLLNGEIPGQIGNCNQLEMLDLHRNQLQGTIPSSFEFLVVLNVLDLSTNRISGSIPQNLGKLTSLNKLIISGNGITGLIPQSMGLCTNLQLLDISNNRISGSIPDEIGQLQGLDILLNLSWNSLTGPIPESFSNLSKLSNLDLSHNKLTGSLRILGSLDNLVSLNVSYNSFYGSLPDTKFFHDLPAAAFVGNPELCINNCEMNRNHQSIKSVRNVIIYTFLGVILTAMFVTFGVIFALRIHGATFERRFDEESEMEWTFTPFQKLNFSINDIVTKLSDSNVVGKGCSGIVYRVETPMKQIIAVKKLWPVKNDEPPERDLFSAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYISNGSLCGLLHEKRLFLDWDARYKIILGAAQGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFIADFGLAKLVNSSECSKASAIVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLEVLTGMEPTDNRIPEGAHIVSWVSREIREKKREFTSILDQQLVLQCGTRTPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHETDIFEKPSFLQKGEVTNPKVAVHCSSFSRSCEPLIESSSSSSSS 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1430 1049 SUPERFAMILY Protein kinase-like (PK-like) 706 1007 IPR011009 -
Prci2g1430 1049 Gene3D Ribonuclease Inhibitor 29 137 IPR032675 -
Prci2g1430 1049 ProSiteProfiles Leucine-rich repeat profile. 585 607 IPR001611 GO:0005515
Prci2g1430 1049 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 407 479 - -
Prci2g1430 1049 Gene3D Transferase(Phosphotransferase) domain 1 803 1017 - -
Prci2g1430 1049 SMART LRR_typ_2 140 164 IPR003591 -
Prci2g1430 1049 SMART LRR_typ_2 285 309 IPR003591 -
Prci2g1430 1049 SMART LRR_typ_2 486 510 IPR003591 -
Prci2g1430 1049 SMART LRR_typ_2 438 462 IPR003591 -
Prci2g1430 1049 SMART LRR_typ_2 606 639 IPR003591 -
Prci2g1430 1049 SMART LRR_typ_2 357 381 IPR003591 -
Prci2g1430 1049 SMART LRR_typ_2 116 139 IPR003591 -
Prci2g1430 1049 SMART LRR_typ_2 583 605 IPR003591 -
Prci2g1430 1049 SMART LRR_typ_2 534 558 IPR003591 -
Prci2g1430 1049 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 24 199 - -
Prci2g1430 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Prci2g1430 1049 PRINTS Leucine-rich repeat signature 119 132 - -
Prci2g1430 1049 PRINTS Leucine-rich repeat signature 583 596 - -
Prci2g1430 1049 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 700 802 - -
Prci2g1430 1049 Gene3D Ribonuclease Inhibitor 138 233 IPR032675 -
Prci2g1430 1049 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 249 999 - -
Prci2g1430 1049 SMART serkin_6 724 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1430 1049 ProSiteProfiles Protein kinase domain profile. 724 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1430 1049 FunFam Putative LRR receptor-like serine/threonine-protein kinase 564 649 - -
Prci2g1430 1049 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Prci2g1430 1049 Pfam Leucine rich repeat 464 523 IPR001611 GO:0005515
Prci2g1430 1049 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Prci2g1430 1049 Gene3D Ribonuclease Inhibitor 239 404 IPR032675 -
Prci2g1430 1049 Gene3D Ribonuclease Inhibitor 405 654 IPR032675 -
Prci2g1430 1049 Pfam Leucine Rich Repeat 536 556 IPR001611 GO:0005515
Prci2g1430 1049 Pfam Leucine Rich Repeat 565 583 IPR001611 GO:0005515
Prci2g1430 1049 SUPERFAMILY L domain-like 409 644 - -
Prci2g1430 1049 Pfam Protein kinase domain 727 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1430 1049 Gene3D Phosphorylase Kinase; domain 1 689 802 - -
Prci2g1430 1049 FunFam LRR receptor-like serine/threonine-protein kinase 484 559 - -
Prci2g1430 1049 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 803 1017 - -
Prci2g1430 1049 ProSiteProfiles Leucine-rich repeat profile. 536 558 IPR001611 GO:0005515
Prci2g1430 1049 ProSitePatterns Protein kinases ATP-binding region signature. 730 758 IPR017441 GO:0005524
Prci2g1430 1049 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 200 406 - -
Prci2g1430 1049 SUPERFAMILY L domain-like 37 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1430 Prci-Chr2 10694828 10699279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1430 22 1018 Receptor kinase-like Gene Family AT5G56040 45.118 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci2g1430 Pkinase 9.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1430 - - cit:102624202 1485.32