Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1421 ATGGTGGTGCCTAAACTATCCTACGAGGAGAGTCGCCGCAAAAGATTGGAGGAGAACCAGAAGCGAATCGAAGCCCTTAATCTGCCCCAGCTTTCTCAAGCCCTACGAAATTCCCCTTCTCCCAAATCCTCTCCTATGAAGCATACCAAATCTCGCTCAACCCAGAAACAGATAGTTGTTGTAAGGAGGTCTGGCCGTGTCGCAAATATGCCTGCTCCTGTTTACAAAGAAGTGGTTATTGATCGCGTGGCAATACCTAGAAGAGTTTACGGGACCAAAAGAAATTTGTCAAATTGCGTACTTGCTTCAGAGGAAGCCAGGGAGGAAGCTTTTGGAAGAGCAGAGAAACTACTCCCGGATTTAGAATCTGAATATCCAACATTCATAAAGTCGATGCTTCCGTCGCATGTAAGCGGTGGATTTTGGCTGGGTCTTTCAGTCCAGTTCTGTAAGACTTACCTTCCAAAGCGGGACGAAATGATTACGTTGATAGATGGAGATGGAGATGAGTACTCAACAGTATATTTGGCTCGGAAAACTGGGCTCAGCGGTGGATGGAAAGGTTTTGCGGTGGCTCATAACCTAGCTGATGGTGACGCATTAGTTTTTCAGTTAATCAGACCTACAGCATTCAAGGTGCACATTATTAGAGTGAAGAGTCCTACTCCTACAGAGGGCAATTAG 684 0.4591 MVVPKLSYEESRRKRLEENQKRIEALNLPQLSQALRNSPSPKSSPMKHTKSRSTQKQIVVVRRSGRVANMPAPVYKEVVIDRVAIPRRVYGTKRNLSNCVLASEEAREEAFGRAEKLLPDLESEYPTFIKSMLPSHVSGGFWLGLSVQFCKTYLPKRDEMITLIDGDGDEYSTVYLARKTGLSGGWKGFAVAHNLADGDALVFQLIRPTAFKVHIIRVKSPTPTEGN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1421 227 Gene3D - 102 220 IPR015300 -
Prci2g1421 227 MobiDBLite consensus disorder prediction 27 57 - -
Prci2g1421 227 SUPERFAMILY DNA-binding pseudobarrel domain 122 218 IPR015300 -
Prci2g1421 227 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
Prci2g1421 227 SMART B3_2 128 219 IPR003340 GO:0003677
Prci2g1421 227 Pfam B3 DNA binding domain 128 217 IPR003340 GO:0003677
Prci2g1421 227 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 33 219 IPR044837 -
Prci2g1421 227 CDD B3_DNA 126 217 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1421 Prci-Chr2 10655216 10658168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1421 55 220 B3 DNA Binding Superfamily AT5G42700 60.843 5.74e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci2g1421 B3 5.1e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1421 - - qsa:O6P43_018914 311.997