Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1395 ATGGCCTTAGCAACAGGAAGAAGCTTCCCTTTGCAGCCATGCTCTTTATTTAAAAATGATAGCTTTAATAAATGTCCAGGAGGTGGCACATCCTCGTGGCTTGGGCTTGCTGGTGCAGAGATTACAAAGCCTTGTAGGCGAACCCGTATTGCAGCTCAACAGCGACCTACGTGGCTCCCAGGGCTTGATCCTCCTCCTTATCTTGATGGAACTCTGGCTGGAGATTTTGGATTCGATCCACTTGGACTTGGAGAAGACCCGGCAAGCTTGAGGTGGTATGTGCAAGCAGAGCTGGTTCATGCTCGCTTTGCAATGATTGGGGTCTCTGGAATTCTGCTGACAGATACACTTCGTTTTGCAGGACTTAAAACCATACCAGTTTGGTATGAGGCTGGTGCAGAAAAATATTTTGCTGATGCAAAGACCCTTCTTATTATCCAGCTATTTTTGATGGGCTTTGTTGAAACAAAACGGTATATGGATTTCGTAAGTCCGGGATCTCAAGCTAAAGAGGGATCCTTCTTTGGACTGGAAGCTGCATTTGAAGGTTTAGAACCAGGGTATCCTGGCGGTCCTTTGCTAAATCCTCTCGGCCTAGCGAAGGATATAAAAAACGCTCATGAATGGAAACTTAAAGAGATTAAGAACGGGAGACTTGCAATGGTAGCAATGCTTGGGATCTTCGTGCAAGCTTCAGTAACTCATGTTGGACCAATTGATAACCTTGTGGAACATCTTTCCAATCCGTGGCACAAAACTATTGTTCAGACCCTTGGCAGCTCTAGTTAA 789 0.455 MALATGRSFPLQPCSLFKNDSFNKCPGGGTSSWLGLAGAEITKPCRRTRIAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPASLRWYVQAELVHARFAMIGVSGILLTDTLRFAGLKTIPVWYEAGAEKYFADAKTLLIIQLFLMGFVETKRYMDFVSPGSQAKEGSFFGLEAAFEGLEPGYPGGPLLNPLGLAKDIKNAHEWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIVQTLGSSS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1395 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 50 257 IPR001344 GO:0009765|GO:0016020
Prci2g1395 262 SUPERFAMILY Chlorophyll a-b binding protein 48 258 - -
Prci2g1395 262 Pfam Chlorophyll A-B binding protein 64 231 IPR022796 -
Prci2g1395 262 FunFam Chlorophyll a-b binding protein, chloroplastic 56 262 - -
Prci2g1395 262 Gene3D Chlorophyll a/b binding protein domain 65 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1395 Prci-Chr2 10563864 10565623 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1395 41 254 Chloroplast and Mitochondria Gene Families AT3G61470 45.622 7.80e-62 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1395 K08911 - gmx:100804934 383.259