Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1380 ATGTCGGCAGTGTGCACTGTTCCCCCACCTTATGTCTTTCTTATAAGCCAACCAAATGAAGAACCACTAGGGACATTCGACACTTGGCGCCTCTCCCCGTTAGCACACCATCCCTGCTCGCTTTTGTTTTTCTCTCCAAATTTAGAACTTATACTAAGATTTTACCAAACTGGGACCAAAATGAACTTCGGTAATGAGCATGGAGGCGGAAACGCCGGCGGCGGAAGGCCTCTGGCAAATTTTCCGCTGGCACGACAACCGTCAGTCTACTCCCTGACATTCGATGAGTTTGTGAGTACTATGGGAGGTTCTGGAAAGGACTTTGGGTCGATGAACATGGATGAGCTGCTTAAGAACATCTGGAGTGCTGAAGAGGTTCAAACAATGGCTTCCTTGAGTGGTGGTCAACTGGGTGGAAGTGCCTCTGGTGGGCATTTGCAGAGACAAGGCTCCTTGACGTTGCCGCGAACACTTAGCCAGAAAACCGTAGATGAGGTTTGGAAGGATATTTCCAAGGACAATGGTGCGGAGAAGGATGCTCCAAATATCCCACAGAGGCAGCAGACTTTGGGAGAGATAACGTTGGAAGAGTTCTTGGTGAGAGCAGGAGTTGTCAGAGAAGAAGCACAAGCACAATTGTTGGGAAAGCCAAATGGTATGGATTTCCCCGATTTATCTCGTACTGGAAATAATAATGGTGTAGGATTGGGTTTTCAGCAGATGAACAAGGGTTCAGACTTAATGACAAACCAAATTACCGGGAATAATGACCAGCTACCTCTTCAGTCTCGCGCCAATTTGCCATTGAATGTAAACGGTGCTAGATCGAATCAGCAACAGATGCCGAATTCAAAGTTACCACAGCCACAGATATTTCCAAAGCAGCCTGCCATGCCTTATGCTGGTCAGATGCCATTAACGAACAACGCTCAGCTAGGTAATCAAGGAATGAGAGGTGGAATGGCGGGTATTGTGGATCAGGGTCTGAATGGTAATCTGGTTCAGAGTTCAGCGCTGCAAAGTGGAGGGATGGGCATGATTGGTTTAGGACCTGGGGCTGTTCGTGTGGCTACAGGATCACCAGCTAATCAGCTGTCTTGTGACGAAATTGGAAAGAATAATGATGACACTTCGTCAGTGTCGCCACTTCCTTATGTGTTCAATGGTGGTTTAAGAGGGAGGAAAACCAGTGGGGCTGTAGAGAAGGTTATTGAGAGGAGACAGAGGAGAATGATCAAGAACAGAGAGTCTGCTGCTAGGTCCCGGGCTCGTAAGCAGGCCTATACCATGGAATTGGAGGCAGAAGTTGCAAAGTTAAAAGAGGAGAATGAAGAACTTAGGAGGAAGCAGGCAGAAATCATGGAAATGCAAGAGAATCAAATATCATGCCTCGTCTGTAGACTAATTGACCAGAATAACGTGGTGTCATGCTCTTAA 1437 0.4704 MSAVCTVPPPYVFLISQPNEEPLGTFDTWRLSPLAHHPCSLLFFSPNLELILRFYQTGTKMNFGNEHGGGNAGGGRPLANFPLARQPSVYSLTFDEFVSTMGGSGKDFGSMNMDELLKNIWSAEEVQTMASLSGGQLGGSASGGHLQRQGSLTLPRTLSQKTVDEVWKDISKDNGAEKDAPNIPQRQQTLGEITLEEFLVRAGVVREEAQAQLLGKPNGMDFPDLSRTGNNNGVGLGFQQMNKGSDLMTNQITGNNDQLPLQSRANLPLNVNGARSNQQQMPNSKLPQPQIFPKQPAMPYAGQMPLTNNAQLGNQGMRGGMAGIVDQGLNGNLVQSSALQSGGMGMIGLGPGAVRVATGSPANQLSCDEIGKNNDDTSSVSPLPYVFNGGLRGRKTSGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRRKQAEIMEMQENQISCLVCRLIDQNNVVSCS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1380 478 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 409 424 IPR004827 GO:0003700|GO:0006355
Prci2g1380 478 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 404 461 - -
Prci2g1380 478 SUPERFAMILY Leucine zipper domain 406 456 IPR046347 GO:0003700|GO:0006355
Prci2g1380 478 CDD bZIP_plant_BZIP46 406 457 - -
Prci2g1380 478 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 83 454 IPR043452 GO:0003700|GO:0045893
Prci2g1380 478 Gene3D - 404 460 - -
Prci2g1380 478 Pfam bZIP transcription factor 406 458 IPR004827 GO:0003700|GO:0006355
Prci2g1380 478 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 404 455 IPR004827 GO:0003700|GO:0006355
Prci2g1380 478 Coils Coil 422 459 - -
Prci2g1380 478 SMART brlzneu 402 466 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1380 Prci-Chr2 10475694 10479911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1380 83 427 bZIP Transcription Factor Family AT1G45249 53.022 2.67e-91 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci2g1380 bZIP_1 4.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1380 K14432 - qsa:O6P43_018931 532.332