Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1379 ATGAACTTCGGTAATGAGCATGGAGGCGGAAACGCCGGCGGCGGAAGGCCTCTGGCAAATTTTCCGCTGGCACGACAACCGTCAGTCTACTCCCTGACATTCGATGAGTTTGTGAGTACTATGGGAGGTTCTGGAAAGGACTTTGGGTCGATGAACATGGATGAGCTGCTTAAGAACATCTGGAGTGCTGAAGAGGTTCAAACAATGGCTTCCTTGAGTGGTGGTCAACTGGGTGGAAGTGCCTCTGGTGGGCATTTGCAGAGACAAGGCTCCTTGACGTTGCCGCGAACACTTAGCCAGAAAACCGTAGATGAGGTTTGGAAGGATATTTCCAAGGACAATGGTGCGGAGAAGGATGCTCCAAATATCCCACAGAGGCAGCAGACTTTGGGAGAGATAACGTTGGAAGAGTTCTTGGTGAGAGCAGGAGTTGTCAGAGAAGAAGCACAAGCACAATTGTTGGGAAAGCCAAATGGTATGGATTTCCCCGATTTATCTCGTACTGGAAATAATAATGGTGTAGGATTGGGTTTTCAGCAGATGAACAAGGGTTCAGACTTAATGACAAACCAAATTACCGGGAATAATGACCAGCTACCTCTTCAGTCTCGCGCCAATTTGCCATTGAATGTAAACGGTGCTAGATCGAATCAGCAACAGATGCCGAATTCAAAGTTACCACAGCCACAGATATTTCCAAAGCAGCCTGCCATGCCTTATGCTGGTCAGATGCCATTAACGAACAACGCTCAGCTAGGTAATCAAGGAATGAGAGGTGGAATGGCGGGTATTGTGGATCAGGGTCTGAATGGTAATCTGGTTCAGAGTTCAGCGCTGCAAAGTGGAGGGATGGGCATGATTGGTTTAGGACCTGGGGCTGTTCGTGTGGCTACAGGATCACCAGCTAATCAGCTGTCTTGTGACGAAATTGGAAAGAATAATGATGACACTTCGTCAGTGTCGCCACTTCCTTATGTGTTCAATGGTGGTTTAAGAGGGAGGAAAACCAGTGGGGCTGTAGAGAAGGTTATTGAGAGGAGACAGAGGAGAATGATCAAGAACAGAGAGTCTGCTGCTAGGTCCCGGGCTCGTAAGCAGGCCTATACCATGGAATTGGAGGCAGAAGTTGCAAAGTTAAAAGAGGAGAATGAAGAACTTAGGAGGAAGCAGGCAGAAATCATGGAAATGCAAGAGAATCAAGTAAAGGAGATGAGGAATTTGCAACAGGGAGTCAAGAAAAGGTGCTTAAGACGAACACAAACTGGACCATGGTAG 1275 0.4745 MNFGNEHGGGNAGGGRPLANFPLARQPSVYSLTFDEFVSTMGGSGKDFGSMNMDELLKNIWSAEEVQTMASLSGGQLGGSASGGHLQRQGSLTLPRTLSQKTVDEVWKDISKDNGAEKDAPNIPQRQQTLGEITLEEFLVRAGVVREEAQAQLLGKPNGMDFPDLSRTGNNNGVGLGFQQMNKGSDLMTNQITGNNDQLPLQSRANLPLNVNGARSNQQQMPNSKLPQPQIFPKQPAMPYAGQMPLTNNAQLGNQGMRGGMAGIVDQGLNGNLVQSSALQSGGMGMIGLGPGAVRVATGSPANQLSCDEIGKNNDDTSSVSPLPYVFNGGLRGRKTSGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRRKQAEIMEMQENQVKEMRNLQQGVKKRCLRRTQTGPW 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1379 424 SMART brlzneu 342 406 IPR004827 GO:0003700|GO:0006355
Prci2g1379 424 CDD bZIP_plant_BZIP46 346 397 - -
Prci2g1379 424 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 344 401 - -
Prci2g1379 424 Gene3D - 344 401 - -
Prci2g1379 424 Pfam bZIP transcription factor 346 399 IPR004827 GO:0003700|GO:0006355
Prci2g1379 424 SUPERFAMILY Leucine zipper domain 346 395 IPR046347 GO:0003700|GO:0006355
Prci2g1379 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 349 364 IPR004827 GO:0003700|GO:0006355
Prci2g1379 424 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 424 IPR043452 GO:0003700|GO:0045893
Prci2g1379 424 Coils Coil 362 414 - -
Prci2g1379 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 344 407 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1379 Prci-Chr2 10475091 10479877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1379 19 424 bZIP Transcription Factor Family AT4G34000 45.815 3.52e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci2g1379 bZIP_1 6.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1379 K14432 - qsa:O6P43_018931 574.318