Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1368 ATGACGAGCTACGCGTTTCTGAACGATCAGCTCTCAAAGCATACTTCAGTTTTTGGGTTAAGACTGTGGGTGCTGCTAGGCGTATGCGTTGGAGCAGCCATTGTTTTTTTACTGTTTGTCATATCACTCTGGTTCGCTGCAAAGCGCAACAATGCTTCCAAGCTCAAGTCTAGTCAGAAACCCAACATACCAAATGTGTCCAGGGAGATCCAGGAAATCCGGCTTGACCATTCTCGTGAACCAACTAAGCCAGTCCTCTTGCCCTACCCCGACCCACTGCCGGAATCACAGTCCGAGGCTCTAGAAAGAGCCCAAGCCATTCTTCTTCAGCAGGAGGACGAAAGCCCAGGAACAGGGCCCCGCAGAATCCACATTGAAATTGGAAAGGGCCACTGCATTTCGTACCCTGAGAGGGGGGGCGGTTCATCGCATGGCAGCGGGGAGGTTCGGTCAGGCGAGCAACTCTCCATTGCTGCGCCGGAAGTTTCTCATTTGGGTTGGGGGCATTGGTACACTCTTCGAGAGCTTGAGGTCTCCACCAATTTTTTCGCCGATGAGAACGTCATAGGTGAAGGAGGCTACGGGATTGTTTACCGAGGGGTGTTGCAAGATAATACCAATGTTGCTGTTAAAAATTTGCTAAACAATAAGGGTCAAGCTGAGAGGGAATTCAAGGTGGAAGTTGAAGCAATTGGGCGCGTTCGGCATAAAAATTTGGTGAGGTTGCTTGGGTATTGTGTTGAAGGAGCTCATAGGATGCTTGTTTATGAGTATGTGGACAATGGAAATCTAGAACAGTGGCTTCATGGAGATGCCGGCCCTTCTAGTCCCCTGACGTGGGATATTCGAATGAATATAATACTTGGAACTGCAAAAGGGTTGACATACCTTCACGAGGGCCTTGAGCCGAAAGTTGTTCATCGTGATATCAAGTCCAGCAATATATTGCTTGATAAGCGATGGAATCCGAAAGTTTCTGATTTTGGGCTTGCAAAACTGTTGGGATCCGAAAGGAGTTATGTGACGACTCGCGTGATGGGAACATTTGGATATGTGGCGCCAGAATATGCAAGCACTGGCATGTTAAACGAAAGAAGCGATGTGTATAGCTTTGGAGTCCTTCTTATGGAGATCATCTCTGGTAGAAACCCAGTTGATTACAGCCGTCCTCCAGGAGAGGTGAACCTGGTTGAGTGGCTGAAGACGATGGTTACAAACCGGAATGCAGAAGGTGTTCTGGATCCTAGGCTACCTGAGAAACCTTCTTCCAGAGCACTGAAGCGTGCCTTGTTAGTAGCTTTACGGTGTGTAGATCCAAATGTCCAGAAAAGGCCAAAAATGGGACACGTTATACATATGCTCGAAGCCGATGAGTTCCCATTTCGAGATGACCGTAGAGCTGGAAGGGAATATGGACGGTCCCAGCAGGATAACACGAGAGATAGGTTGATGGAAAAGCGAGTAAGCAAAGCCGGTGACAGCAGTGCATATGAAAGTAGTTCCCACACTATATAG 1515 0.4818 MTSYAFLNDQLSKHTSVFGLRLWVLLGVCVGAAIVFLLFVISLWFAAKRNNASKLKSSQKPNIPNVSREIQEIRLDHSREPTKPVLLPYPDPLPESQSEALERAQAILLQQEDESPGTGPRRIHIEIGKGHCISYPERGGGSSHGSGEVRSGEQLSIAAPEVSHLGWGHWYTLRELEVSTNFFADENVIGEGGYGIVYRGVLQDNTNVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVDNGNLEQWLHGDAGPSSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKRWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLLMEIISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLPEKPSSRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDDRRAGREYGRSQQDNTRDRLMEKRVSKAGDSSAYESSSHTI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1368 504 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Prci2g1368 504 MobiDBLite consensus disorder prediction 465 492 - -
Prci2g1368 504 PANTHER OS01G0323000 PROTEIN 1 485 - -
Prci2g1368 504 Gene3D Transferase(Phosphotransferase) domain 1 259 466 - -
Prci2g1368 504 FunFam Putative receptor-like serine/threonine-protein kinase 259 469 - -
Prci2g1368 504 ProSiteProfiles Protein kinase domain profile. 183 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1368 504 SMART serkin_6 183 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1368 504 CDD STKc_IRAK 189 455 - -
Prci2g1368 504 Pfam Protein kinase domain 184 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1368 504 Gene3D Phosphorylase Kinase; domain 1 154 258 - -
Prci2g1368 504 MobiDBLite consensus disorder prediction 465 504 - -
Prci2g1368 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Prci2g1368 504 SUPERFAMILY Protein kinase-like (PK-like) 165 455 IPR011009 -
Prci2g1368 504 FunFam Probable serine/threonine-protein kinase At1g01540 163 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1368 Prci-Chr2 10348169 10351167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1368 128 497 Trihelix Transcription Factor Family AT1G70460 43.307 1.08e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci2g1368 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1368 - - qsa:O6P43_016049 854.358