Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1353 ATGGAAGCAGGGGAAGATTGTTGCGTCAAGGTTGCTGTCCATGTCCGACCGCTCATCAGTGATGAAAAGCTTCAGGGATGTAAAGACTGTGTCATTGTCGTCCCTGGGAAGCCTCAGGTGCAAATTGGTGCTCATTCCTTCACATTTGATCATGTTTACGGGAGTACTGGTTCTCCTTCATCCTCTATGTTTGAAGAATGTGTCGCTCCCCTTGTTGATGGTTTATTCCAAGGATATAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCAGGGAAAACATACACCATGGGTACTGGTTTTAAAGATGGTTGCCAAACAGGCATAATACCCCAAGTCATGAATGTTTTGTTCAGCAAAATTGAGACTTTAAAGCATCAGATTGAATTTCAATTGCATGTTTCCTTCATTGAGATTCTTAAAGAAGAAGTACGAGACTTGTTGGATCCTTCTTCCATGAGCAAGCAAGAAGCTGCTAATGGACATGCAGGAAAAGTGACCGTCCCTGGGAAACCTCCCATACAAATTCGTGAGACATCAAATGGTGTTATTACACTAGCTGGATCTACTGAAGTTAGTGTTTCAACACTGAAAGAAATGGCTGCTTGGCTGGAACAAGGGTCATTGAGCAGAGCTACTGCGAGCACAAATATGAATAACCAATCCAGTCGTTCACATGCCATTTTCACCATCACATTAGAGCAAATGCATAAACCCAAGGCTGTTATGCCTGGCGAGAACGGTTTAAATGAGTCAATTAATGATGAGTATCTTTGTGCTAAGTTGCACCTCGTGGATCTTGCTGGCTCAGAACGAGCTAAAAGAACAGGCTCTGATGGTCTGCGTTTTAAGGAAGGAATTCATATTAACAAGGGCCTCCTGGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTCGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTCAACACTTTGAAGTATGCAAATCGTGCACGCAATATTCAAAATAAACCTGTTGTCAACAGAGATCCCATGTCCAGCGAAATGCTGAAAATGAGACAACAGCTAGAGTATTTGCAAGCAGAACTTTGTGCTCGTGCTGGGGGCTCTTCTGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAGAATCTTTGCCGCGAACTTCACGAATACCGTAGCAGATGTTCTGTTGTAGAACAATGTGAAAAGGACGCTCTTGATGGTAGCCCATGCATTGTTAAGACTGATGGGCTCAAGAGGAGCTTTCCTATCATAGCATCTGATTATTCAGTGAATGAAACAACAGCAGGTGATCCAAGAGAGATTGAAGAAGTGGCAAAAGAATGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTGCACGAGTTAAATAAACGCTTGGAGCAGAAAGAGACTGAAATGAAGCTTTTTGGAGCATCTGATGCTGAAGTACTCAAGCATCACTTTGGAAGGAAAATAATGGAGTTGGAGGATGAGAAGAGAGCTGTCCAGCAAGAAAGGGATCGTCTATTAGCTGAGGTTGAAAATCTTTCTGCTAATTCTGATGGACAAACACAGAAATTAGAGGATGTCCATGCCCAAAAATTGAAATCACTTGAATCACAGATTCTGGATCTGAAGAAGAAACAAGAGAGCCAGGTTCAGCTTATGAAGCAGAAGCAAAAAAGTGATGAGGCAGCGAAGAGACTGCAAGACGAAATACAATCTATAAAAGCCCAGAAGGTTCAATTGCAACAAAGGATTAAACAAGAGGCAGAGCAATTTCGGCAGTGGAAGGCTTCTAGAGAAAAAGAACTCCTGCAATTACGAAAGGAAGGAAGGAAAAATGAGTATGAAAGACATAAGCTACAAGCTTTAAATCAGCGCCAGAAAATGGTCCTTCAAAGAAAGACTGAAGAAGCTGCCATGGCCACCAAGAGACTAAAGGAGTTGTTAGAAGCTCGGAAATCTTCCAGCCGAGATACTTCATCTATTATCAACGGAAGTGGAACAAATGGACAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGGTGAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCTCTTGCTGAAGAGTTAGCCATACTGAAGCAAGTGAATGAATTTGCTGCAAAGGGCCTCACTCCTCCAAGAGGAAAGAATGGTTTTGCTAGAGCATCCTCCATGTCACCAAATGCAAGAATGGCTAGAATAGCTTCGCTGGAGAACATGCTGAGCATATCATCTAATTCACTAGTGGCAATGGCTTCTCAACTTTCTGAAGCAGAAGAAAGAGAACGAGCTTTTACTAATCGCGGACGCTGGAACCAACTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTCAATTCTGTTGCAGATGCTAGATGCCAACTGTGGGAGAGAGATATGGAGATCAGGGAAATGAAAGAACAAATTAAAGAACTTGTAGGCCTATTACGGCAGAGTGAGATGAAGCGAAAGGAAACTGAGAAGGAGCTGAAATTGAGAGATCAAGCGCTTGCAACCACATTGGCTACACCAGCTTCTGGGAACTCACCAAATTCAGTGAAACACTACGTTGAAGATATGAATGGATCGTTATCTCCGGTGTCTGTGCCAGTACCAAAACAGCTCAAGTATACCCCAGGAGTCGTTAATGGCCTCGCAGGGGAATCCGCAGCATTTATAGATCAGAGTAGAAAGGTAAGATTTTTATTTTTGTTTACAATAATTTTGGACGTGCCTCTTTTACCAGGAGGAAAAGGACGTTAG 2949 0.4293 MEAGEDCCVKVAVHVRPLISDEKLQGCKDCVIVVPGKPQVQIGAHSFTFDHVYGSTGSPSSSMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIETLKHQIEFQLHVSFIEILKEEVRDLLDPSSMSKQEAANGHAGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAAWLEQGSLSRATASTNMNNQSSRSHAIFTITLEQMHKPKAVMPGENGLNESINDEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSSEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANENLCRELHEYRSRCSVVEQCEKDALDGSPCIVKTDGLKRSFPIIASDYSVNETTAGDPREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKETEMKLFGASDAEVLKHHFGRKIMELEDEKRAVQQERDRLLAEVENLSANSDGQTQKLEDVHAQKLKSLESQILDLKKKQESQVQLMKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSSRDTSSIINGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAILKQVNEFAAKGLTPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWERDMEIREMKEQIKELVGLLRQSEMKRKETEKELKLRDQALATTLATPASGNSPNSVKHYVEDMNGSLSPVSVPVPKQLKYTPGVVNGLAGESAAFIDQSRKVRFLFLFTIILDVPLLPGGKGR 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1353 982 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 395 IPR027417 -
Prci2g1353 982 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 911 IPR027640 GO:0003777|GO:0007018
Prci2g1353 982 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci2g1353 982 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1353 982 Coils Coil 593 641 - -
Prci2g1353 982 Coils Coil 526 567 - -
Prci2g1353 982 Coils Coil 864 891 - -
Prci2g1353 982 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1353 982 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1353 982 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1353 982 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1353 982 Coils Coil 405 432 - -
Prci2g1353 982 Gene3D Kinesin motor domain 2 393 IPR036961 -
Prci2g1353 982 CDD KISc_KIF4 7 366 - -
Prci2g1353 982 Coils Coil 493 513 - -
Prci2g1353 982 Coils Coil 674 694 - -
Prci2g1353 982 MobiDBLite consensus disorder prediction 698 718 - -
Prci2g1353 982 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Prci2g1353 982 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1353 982 Pfam Kinesin motor domain 38 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci2g1353 982 MobiDBLite consensus disorder prediction 692 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1353 Prci-Chr2 10217459 10228377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1353 49 404 Calmodulin-binding Proteins AT5G65930 34.734 2.72e-52 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1353 - - gmx:100802585 1663.66