Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1350 ATGATCAGGGTTCCTCCAAAAATTGTAGTTTCAACTTTGTACATCCTTATACTGTCCCTTCCTGTCCAAACTCTAGCACATGTTGCTGACACAGATCCACTGGAATTCAACAGTGGCTACAGCAGCCAAGGTGGTGGAGGTGAGGTCTCCAGCAAAAGCTGCAAAAATGAATTCCACCCAATACCCTTCCCATCCCCATGTCAAACGTCAATAGGCACTGAAGCATCTCCAGTTTTACCTCTCCAAACAGATGGTCTGGTATTTGCAGATCAGAGACTTGAAGTTGTGTACCCGGTTATCCAAAAATTCAAATCCACCATCACCTCTGACCCCCTAGGCGTCATCAAATCGTGGGTAGGCTCAAATATTTGCAGCTATAAAGGTTTCTACTGTGATAATCCCCCGGACAACACATCAGCCATTGGTGTGGCCTCCATTGATTTCAATGGATTTCAACTTGGAGCTCCTACCCTCGACGGCTTCATTGATCAGCTTCCTGATATTGCTCTCTTCCATGCAAATTCCAACAATTTTAGAGGCACCATCTCCACTAAAATCTCCAAGCTTCCTTATCTTTACGAGCTTGATGTAAGCAACAATCTGCTGTCTGGTCCATTTCCCATGGCCGTCTTGGGCATGAACACCCTAACATTCTTGGACATTCGCTTCAACCTGTTCTCTGGGCAAGTCCCTCCCCAGATATTCACCCAGAATCTCGATGTCCTCTTCATCAACAACAACGACTTCACTCACAGCTTGCCTGATAACTTAGGCACCACTCATATTCTTTATCTCACCTTAGCCAACAACAAATTCATGGGTCCAATACCTAGAAGCCTCCCCAAAGCTCTGTCTACTCTCACCGAGGTATTATTCCTGAACAACCAGTTAACAGGTTGTATCCCATATGAGATTGGGTTTCTTGAGGAGGCCAGAGTGTTTGATGCTGGAAACAACCGGCTAACAGGTCCATTGCCCATGTCCTTGGGTTGCCTTGAGCAGTTGGAACTCCTCAATTTGGCTGATAATCTCCTGTATGGTATGGTACCAGAGGTGTTGTGCGGACTAGAGAATTTGGTCAATTTATCACTTTCAGATAATTATTTCACGCATGTAGGACCCCTGTGTAGGACCTTAATTCAGCGAGGGGTTCTTGATGTTAAGAACAATTGCATTCCTGATCTTCCATTCCAGAGATCAGTGATTGAGTGTGCAGATTTCTTTGTGTACCCCAGAATGTGTTCCCACATGTGGTTTCATAGTTTCATTCCTTGTAAGTTTCCTTTCCACAAGTCTTCAGCTTCTGCCATTCCTTAG 1317 0.4495 MIRVPPKIVVSTLYILILSLPVQTLAHVADTDPLEFNSGYSSQGGGGEVSSKSCKNEFHPIPFPSPCQTSIGTEASPVLPLQTDGLVFADQRLEVVYPVIQKFKSTITSDPLGVIKSWVGSNICSYKGFYCDNPPDNTSAIGVASIDFNGFQLGAPTLDGFIDQLPDIALFHANSNNFRGTISTKISKLPYLYELDVSNNLLSGPFPMAVLGMNTLTFLDIRFNLFSGQVPPQIFTQNLDVLFINNNDFTHSLPDNLGTTHILYLTLANNKFMGPIPRSLPKALSTLTEVLFLNNQLTGCIPYEIGFLEEARVFDAGNNRLTGPLPMSLGCLEQLELLNLADNLLYGMVPEVLCGLENLVNLSLSDNYFTHVGPLCRTLIQRGVLDVKNNCIPDLPFQRSVIECADFFVYPRMCSHMWFHSFIPCKFPFHKSSASAIP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1350 438 Gene3D Ribonuclease Inhibitor 98 259 IPR032675 -
Prci2g1350 438 Pfam Leucine rich repeat N-terminal domain 101 132 IPR013210 -
Prci2g1350 438 Gene3D Ribonuclease Inhibitor 260 402 IPR032675 -
Prci2g1350 438 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 281 372 - -
Prci2g1350 438 SUPERFAMILY L domain-like 102 392 - -
Prci2g1350 438 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 71 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1350 Prci-Chr2 10211492 10213643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1350 86 411 Leucine-rich Repeat extension Gene Families AT3G24480 43.252 4.93e-85 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1350 - - gmx:100789584 615.535