Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1347 ATGGCTGTGGAGCTTATATCGGGTTGCGGGGATGTTAGTTTTGCAGGCAGGACGGAACTAGACGACACAATCGCGGTGCAGGAAGCTACGGCCGCGGGCATTCACAGCGTCAAGAAGCTCATGACAATAATTTCTCAGCAACGACAGAGCCGGGACGAGGAGGCTTCTAGCTCCCGAGGGCCTTCGGAATTGGAAGCTCTGGCAGATACGGCAATGAACAAGTTCAAAAGGGTCATCTCTCTGTTGGACAGGCCGAGAATTGGCCACGCTCGTTTCAGAAAAGCTCCTGCAACACAGGCTTCGATCCCTCTTCTCCCGCTGCGGCAGACGCCGGATTCCGAAACCGGACTGCCTCCTGTTACAGAACGCCAGCAGAACAGAACAGAACAACCCTCTGCTTTCAAGGTCTATTGCCCTACACCGGTTTTACGTCTCCCGCCTCTGCCTCACCAGGCGCACCAGCCTCCCCCCTTCCATCGGCCAGAGAAGAAGGAGGCGAACGGCAGTGTTCAATTTTCGGTGTCGCCGCCTGTTTCCGCCGCCAATTCGTATATGTCTGCGTTAACAGGGGATACTGATAGTGTGCAACGCTCTTGTCATTCTTCGGGGTTCCAAATCATTCACAGTCAGAGATCGCAGCAGGGATCCTACCTGGGCAAACCACCTTTGTGTTCGAGTTCTTTAAAGAGGAAATGCAATTCAATGGACGATGCCGGTCTCAAGTGTGGATCATCCTCTGGTCGCTGCCATTGCTCTAAGAAAAGGAAATCAAAGATAAGAAGAGTAATAAGAGTACCAGCAATCAGCTCGAAGTTGGCTGACATTCCGGCTGATGAATATTCGTGGAGAAAATATGGACAGAAGCCTATCAAGGGTTCTCCTCACCCCAGGGGTTATTACAAGTGTAGCAGCGTGAGAGGCTGCCCGGCACGCAAACACGTGGAGCGTGCTATGGACGATCCTACCATGCTCATTGTCACCTACGAAGCTGATCATAATCACTCGATTGAGGTTGCAGCCGCCGCCGTCCTCGAGTCATCCTAG 1044 0.5278 MAVELISGCGDVSFAGRTELDDTIAVQEATAAGIHSVKKLMTIISQQRQSRDEEASSSRGPSELEALADTAMNKFKRVISLLDRPRIGHARFRKAPATQASIPLLPLRQTPDSETGLPPVTERQQNRTEQPSAFKVYCPTPVLRLPPLPHQAHQPPPFHRPEKKEANGSVQFSVSPPVSAANSYMSALTGDTDSVQRSCHSSGFQIIHSQRSQQGSYLGKPPLCSSSLKRKCNSMDDAGLKCGSSSGRCHCSKKRKSKIRRVIRVPAISSKLADIPADEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAMDDPTMLIVTYEADHNHSIEVAAAAVLESS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1347 347 ProSiteProfiles WRKY domain profile. 271 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1347 347 Pfam Plant zinc cluster domain 229 274 IPR018872 -
Prci2g1347 347 SMART WRKY_cls 276 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1347 347 SUPERFAMILY WRKY DNA-binding domain 274 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1347 347 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 26 336 IPR044810 GO:0003700
Prci2g1347 347 Gene3D WRKY domain 263 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1347 347 Pfam WRKY DNA -binding domain 278 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1347 347 FunFam WRKY transcription factor 65 260 337 - -
Prci2g1347 347 MobiDBLite consensus disorder prediction 107 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1347 Prci-Chr2 10206167 10207931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1347 13 297 WRKY Transcription Factor Family AT4G24240 45.981 1.89e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g1347 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1347 - - lja:Lj0g3v0162929.1 363.999