Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1341 ATGGCTCATCATCCGCATCAGCTAGACAACCCCAGGTTCCACTTGGATGCCTTGTACTGTTCGGAAGAGCACTTGGAGGAACAATCAGGCCCCGAATATTTCCACCACGAATTAGAACAAGTAGACGAGTGCTATCCTGGCAGTGACGCTCAAACAAAGGCACCTCCGGTGTTGCTCGAACAGGACCTTTTGTGGGATGATGAAGAGCTAACGTCTCTGCTGGCCAAGGAACGTGAAAGCCAACTCTGTACGCTACTGGAAACCAACCCTCTTCTCTCCGCAGCTCGCAGAGAAGGCGTGGAGTGGATTCTCAAAGTGAATGCCCACTACTCCTTCTCTGTCCTCACAGCTGTTCTTGCCGCAAACTACCTCGACAGGTTCCTGTTCCACTTTCAAATTCAGGATGGAAAGCCTTGGATGATCCATCTTGCTGCCGTCGCTTGTCTTTCCCTCGCGGCCAAGGTGGAGGAGACCCACGTCCCCCTTTTACTCGACCTCCAAGTGGAGGAGAGCACATACCTGTTCGAAGCCAAAACCATCAAAAGGATGGAGATTTTGGTGCTTTCCTCTCTTGAGTGGAAGATGAACCCTGTAACCCCACTATCGTTTCTCGATTACATGACTCGGAGGCTGGGCTTAAGGGATTATCTCTGCTGGGAGTTCCTCAGGAGGTGCCAAGGCATTATTCTGTCCCTCATTACAGATTCGAGGTTTATGAGTTATCTTCCTTCTGTGGTGGCGACTGCGACAATGATGCACGTTGTGAATGGTGTGGAAGCCGGCCTAGGAGTGGAATACAGAAACCAGCTTCTGGGTATTCTGGGAATCGATAAGCAGGACAAGGTGGATGAATGCCACAAGCTCGTATTGGAATTTACGACAGAGTACCAGGTGAAGCAATCCAACAAACGCACGTTTGGTTCCGTTCCAGGAAGTCCAAACGGTGTGATGGATGCGTCATTCAGTTGCGACAGCTCCAATGATTCGTGGGCCGTGGCTGCGTCTGTTTCGTCGTCACCGGAGCCTCTCTCGAAGAAGGCCAGGACTCAAGATCAGCTTCTTCTAAACCATCCTACTAATTCAGAATTCCTCAGTATTCCTCCCTGA 1107 0.5068 MAHHPHQLDNPRFHLDALYCSEEHLEEQSGPEYFHHELEQVDECYPGSDAQTKAPPVLLEQDLLWDDEELTSLLAKERESQLCTLLETNPLLSAARREGVEWILKVNAHYSFSVLTAVLAANYLDRFLFHFQIQDGKPWMIHLAAVACLSLAAKVEETHVPLLLDLQVEESTYLFEAKTIKRMEILVLSSLEWKMNPVTPLSFLDYMTRRLGLRDYLCWEFLRRCQGIILSLITDSRFMSYLPSVVATATMMHVVNGVEAGLGVEYRNQLLGILGIDKQDKVDECHKLVLEFTTEYQVKQSNKRTFGSVPGSPNGVMDASFSCDSSNDSWAVAASVSSSPEPLSKKARTQDQLLLNHPTNSEFLSIPP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1341 368 Gene3D - 89 196 - -
Prci2g1341 368 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Prci2g1341 368 FunFam D6-type cyclin 79 196 - -
Prci2g1341 368 Pfam Cyclin, C-terminal domain 198 304 IPR004367 -
Prci2g1341 368 CDD CYCLIN_AtCycD-like_rpt2 198 289 - -
Prci2g1341 368 SMART Cyclin_C_2 198 325 IPR004367 -
Prci2g1341 368 SUPERFAMILY Cyclin-like 64 196 IPR036915 -
Prci2g1341 368 FunFam CYCLIN D32 197 287 - -
Prci2g1341 368 SMART cyclin_7 101 189 IPR013763 -
Prci2g1341 368 Pfam Cyclin, N-terminal domain 87 196 IPR006671 -
Prci2g1341 368 PANTHER CYCLINS 74 296 IPR039361 -
Prci2g1341 368 Gene3D - 197 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1341 Prci-Chr2 10145461 10147284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1341 13 304 Core Cell Cycle Gene Families AT4G34160 49.832 5.77e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1341 K14505 - tcc:18591134 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1341 2 10145461 10147284 Prci10g0524 10 3447779 3450341 ECH
Prci2g1341 2 10145461 10147284 Prci5g0243 5 3325180 3327001 ECH
Prci2g1341 2 10145461 10147284 Prci2g1341 2 10145461 10147284 ECH