Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1340 ATGGCTCATCATCCGCATCAGCTAGACAACCCCAGGTTCCACTTGGATGCCTTGTACTGTTCGGAAGAGCACTTGGAGGAACAATCAGGCCCCGAATATTTCCACCACGAATTAGAACAAGTAGACGAGTGCTATCCTGGCAGTGACGCTCAAACAAAGGCACCTCCGGTGTTGCTCGAACAGGACCTTTTGTGGGATGATGAAGAGCTAACGTCTCTGCTGGCCAAGGAACGTGAAAGCCAACTCTGTACGCTACTGGAAACCAACCCTCTTCTCTCCGCAGCTCGCAGAGAAGGCGTGGAGTGGATTCTCAAAGTGAATGCCCACTACTCCTTCTCTGTCCTCACAGCTGTTCTTGCCGCAAACTACCTCGACAGGTTCCTGTTCCACTTTCAAATTCAGGATGGAAAGCCTTGGATGATCCATCTTGCTGCCGTCGCTTGTCTTTCCCTCGCGGCCAAGGTGGAGGAGACCCACGTCCCCCTTTTACTCGACCTCCAAGTGGAGGAGAGCACATACCTGTTCGAAGCCAAAACCATCAAAAGGATGGAGATTTTGGTGCTTTCCTCTCTTGAGTGGAAGATGAACCCTGTAACCCCACTATCGTTTCTCGATTACATGACTCGGAGGCTGGGCTTAAGGGATTATCTCTGCTGGGAGTTCCTCAGGAGGTGCCAAGGCATTATTCTGTCCCTCATTACAGATTCGAGGTTTATGAGTTATCTTCCTTCTGTGGTGGCGACTGCGACAATGATGCACGTTGTGAATGGTGTGGAAGCCGGCCTAGGAGTGGAATACAGAAACCAGCTTCTGGGTATTCTGGGAATCGATAAGGACAAGGTGGATGAATGCCACAAGCTCGTATTGGAATTTACGACAGAGTACCAGGTGAAGCAATCCAACAAACGCACGTTTGGTTCCGTTCCAGGAAGTCCAAACGGTGTGATGGATGCGTCATTCAGTTGCGACAGCTCCAATGATTCGTGGGCCGTGGCTGCGTCTGTTTCGTCGTCACCGGAGCCTCTCTCGAAGAAGGCCAGGACTCAAGATCAGCTTCTTCTAAACCATCCTACTAATTCAGAATTCCTCAGTATTCCTCCCTGA 1104 0.5063 MAHHPHQLDNPRFHLDALYCSEEHLEEQSGPEYFHHELEQVDECYPGSDAQTKAPPVLLEQDLLWDDEELTSLLAKERESQLCTLLETNPLLSAARREGVEWILKVNAHYSFSVLTAVLAANYLDRFLFHFQIQDGKPWMIHLAAVACLSLAAKVEETHVPLLLDLQVEESTYLFEAKTIKRMEILVLSSLEWKMNPVTPLSFLDYMTRRLGLRDYLCWEFLRRCQGIILSLITDSRFMSYLPSVVATATMMHVVNGVEAGLGVEYRNQLLGILGIDKDKVDECHKLVLEFTTEYQVKQSNKRTFGSVPGSPNGVMDASFSCDSSNDSWAVAASVSSSPEPLSKKARTQDQLLLNHPTNSEFLSIPP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1340 367 Pfam Cyclin, C-terminal domain 198 303 IPR004367 -
Prci2g1340 367 SMART Cyclin_C_2 198 324 IPR004367 -
Prci2g1340 367 SUPERFAMILY Cyclin-like 181 298 IPR036915 -
Prci2g1340 367 Gene3D - 197 286 - -
Prci2g1340 367 FunFam CYCLIN D32 197 286 - -
Prci2g1340 367 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Prci2g1340 367 CDD CYCLIN_AtCycD-like_rpt2 198 288 - -
Prci2g1340 367 SUPERFAMILY Cyclin-like 64 196 IPR036915 -
Prci2g1340 367 SMART cyclin_7 101 189 IPR013763 -
Prci2g1340 367 Pfam Cyclin, N-terminal domain 87 196 IPR006671 -
Prci2g1340 367 Gene3D - 89 196 - -
Prci2g1340 367 FunFam D6-type cyclin 79 196 - -
Prci2g1340 367 PANTHER CYCLINS 74 295 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1340 Prci-Chr2 10145461 10147284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1340 13 303 Core Cell Cycle Gene Families AT4G34160 50.000 1.06e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1340 K14505 - aprc:113874132 452.595