Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1337 ATGCATATCTTAATCTTCTTCCTCCTTTCTTTTCTACTGTGTATTCCTTCTCCATGTTCACCTGCAACGACAGATACCCTCCTACAAGGCTCGTCTCTCTCAGTAGAGAAACCAGCTGATACACTCGTGTCGGCCAACGGCGTCTTCTCCGCTGGCTTCTTTCAAGTCGGCGACAATGCTTTCTGCTTTTCCATTCGGTTCACAAGGTCCAAGCAACCCACCCTTGTCTGGATAGCAAATCGAGACCAACCCGTTAATGGGAAAGTTTCAAAGTTAACACTTTTAAAAAATGGCAACCTCATTTTGAGCGATGCAGGAGCAAGTACCATCTGGACCACAGCCACCTTCTCCTCCTCGGAAGTGTATCTCATGCTCATGGACAACGGCAACCTCGTCCTTCGTGCCTCACAAGGCATTGTCTTATGGCAAAGCTTTGACTCCCCAACCGATACCCTTCTTCCTGGTCAACCACTCACCGAGAAAGCGAGCCTTATTTCATCCAGAAGCGCCACCAACTTTTCTTCTGGTTTCTATAAGCTTTACTTCGACAACGATAATGTTCTTCGGCTTCTTTTCAATGGTCCTAACGTTTCTAGCGTGTACTGGCCTCCCACGTGGAAGCTGCCCGTTGATGAGGGCAGGTCCACCTACAACATAACCAAAATTGCAGTGATAGATCCCTCTGGCCATTTTACGTCCTCTGATACTTTCGAATTCTATCCGTCTGATTATGGTGTTAAACGCTATCGGCGATTCCTGATGGATCCTGATGGTAACTTGCGTCTCTATAGCTTCAATGAAGAAACTAGCACGTGGGAGGTCTCGTGGCAAGTCATTCCCCAACCATGTACCGTTCATGGTCTTTGTGGAGCTAACAGCATGTGCACTTACGATCCTTTCGTAGGCAGGACCTGTTATTGCTTGCAAGGATTCAAGATTAAGAATCCCAATGACTGGGCTCAGGGCTGTGAACCTGAATTTACTACCCATCGTGGTTGCAATTCCACAGGGTTTGGTTTTGTTCATCTTCCCAGAATGGAATTATTCGGCTATGACTTGGAGGTAATCCGCGTAACAAACTTGACACAATGTGAAAATAGGTGCTTGGAACTTTGTGATGATTGCCAAGGCGTCCAACTCAAATTCAACGAAGTTAGTACTTATAATTGCTACATCAAAACAATATTGCTCAACGGAAGGGATTCCCCTAATTTCGATGGAGATGTCTATCTCAAATTACCAAAATCAACTATTCTGTCCCTCAAGGTTCCTCAGAAACATGTACCATTGAAGTGCTCAGCCAATCTGTTTCAGAGCTTGGGTAGGACTTACCAAGATTCCAAAAATAGCACGTGGTTGAATTTTTTGCTTTGGTTCGCTTGCGGGATTGGAGTGCTCGAGATGACCTGCATTTTCTTCGTGTGGTTCTTCTTGTTTAGAAGTAGTAAGGAAAATGATAAGGGAGAAAGACAACAACTACTTTCTGCCACAGGGTTTCAAAGGTTCACCTATTCAGAACTCAAAAAGGCCACACGTGGATTCAGCGATGAGATTGGACGGGGAGCGGGAGGGATCGTGTACAAAGGGAAATTAGACAATAATCGCGTAGCAGCAATCAAGAGCCTTATTAGTGAAACTAATCAAGGAGAAGCAGAGTTTCTTGCTGAATTTAGCACGATCGGGATGTTGAACCACATGAATTTGATAGACATGTGGGGATACTGCGTGGAGGGAAAGCACAGACTTCTAGTGTACGAGTACATGGAACATGGATCCTTGGCAGAAAATCTCTACTCCAATGCACTTGACTGGAACAAGAGGTTTAATATTGCAGTCGGTACAGCCAAAGGTTTAGCTTATTTGCACGAAGAATGCTTGGAATGGGTCCTGCATTGTGACGTGAAGCCTCAAAACATACTGTTAGATTCAGATTTTCAACCCAAGGTAGCAGATTTTGGCCTGTCTAAGCTGCTTAATAGGGATGAGGGTGCCAATTCTGGTTTTTCCAGAATCCGAGGGACGAGAGGGTACATGGCGCCTGAATGGGTGTACAACCTAAGAATTACTTCTAAAGTGGACGTATATAGTTATGGGATTGTGGTGTTGGAAATGATAACAGGAAAAAGTCCAATGGGAATCCATATCCTAGAAAACAAAGAAGGTATGGATCAACGGAGGTTGTTGACATGGGTGAAGGAGAAGATGAATGCTGATGGTCCTACAAGCAAGAGCTGGACTGAGGAGGTAGCAGATCCGAATATGCAAGGAAAATACGACCCTGACAAGGTGGAGCTGTTGGTGAAAGTGGCTTTGCGGTGTGTGGAAGATAACATGGATGAAAGACCCTCCATGAGCCAAGTAGTGGAGATGCTTCAGTTTCCAGAGCACTCGTAG 2394 0.4511 MHILIFFLLSFLLCIPSPCSPATTDTLLQGSSLSVEKPADTLVSANGVFSAGFFQVGDNAFCFSIRFTRSKQPTLVWIANRDQPVNGKVSKLTLLKNGNLILSDAGASTIWTTATFSSSEVYLMLMDNGNLVLRASQGIVLWQSFDSPTDTLLPGQPLTEKASLISSRSATNFSSGFYKLYFDNDNVLRLLFNGPNVSSVYWPPTWKLPVDEGRSTYNITKIAVIDPSGHFTSSDTFEFYPSDYGVKRYRRFLMDPDGNLRLYSFNEETSTWEVSWQVIPQPCTVHGLCGANSMCTYDPFVGRTCYCLQGFKIKNPNDWAQGCEPEFTTHRGCNSTGFGFVHLPRMELFGYDLEVIRVTNLTQCENRCLELCDDCQGVQLKFNEVSTYNCYIKTILLNGRDSPNFDGDVYLKLPKSTILSLKVPQKHVPLKCSANLFQSLGRTYQDSKNSTWLNFLLWFACGIGVLEMTCIFFVWFFLFRSSKENDKGERQQLLSATGFQRFTYSELKKATRGFSDEIGRGAGGIVYKGKLDNNRVAAIKSLISETNQGEAEFLAEFSTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMEHGSLAENLYSNALDWNKRFNIAVGTAKGLAYLHEECLEWVLHCDVKPQNILLDSDFQPKVADFGLSKLLNRDEGANSGFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMITGKSPMGIHILENKEGMDQRRLLTWVKEKMNADGPTSKSWTEEVADPNMQGKYDPDKVELLVKVALRCVEDNMDERPSMSQVVEMLQFPEHS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1337 797 CDD B_lectin 41 148 IPR001480 -
Prci2g1337 797 ProSiteProfiles PAN/Apple domain profile. 333 414 IPR003609 -
Prci2g1337 797 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Prci2g1337 797 ProSiteProfiles Protein kinase domain profile. 512 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1337 797 Gene3D Phosphorylase Kinase; domain 1 478 587 - -
Prci2g1337 797 PANTHER OS07G0415500 PROTEIN 5 792 - -
Prci2g1337 797 SMART serkin_6 512 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1337 797 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Prci2g1337 797 FunFam Serine/threonine-protein kinase 588 797 - -
Prci2g1337 797 SMART ntp_6 335 413 IPR003609 -
Prci2g1337 797 Pfam Protein kinase domain 516 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1337 797 SUPERFAMILY Protein kinase-like (PK-like) 491 793 IPR011009 -
Prci2g1337 797 Gene3D - 20 147 IPR036426 -
Prci2g1337 797 SMART blect_4 30 148 IPR001480 -
Prci2g1337 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 203 IPR036426 -
Prci2g1337 797 Pfam D-mannose binding lectin 74 160 IPR001480 -
Prci2g1337 797 Gene3D Transferase(Phosphotransferase) domain 1 588 796 - -
Prci2g1337 797 CDD PAN_AP_plant 329 414 - -
Prci2g1337 797 CDD STKc_IRAK 518 792 - -
Prci2g1337 797 PIRSF SRK 1 795 IPR024171 GO:0004674
Prci2g1337 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Prci2g1337 797 FunFam S-receptor-like serine/threonine-protein kinase 481 587 - -
Prci2g1337 797 Pfam S-locus glycoprotein domain 245 314 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1337 Prci-Chr2 10054610 10057478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1337 446 792 Receptor kinase-like Gene Family AT5G45780 35.574 5.15e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci2g1337 Pkinase 9.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1337 - - gmx:100816469 1099.35