Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1336 ATGGAAGAGTTCACTACTGTGTGCCTCTTATTACTCATCCCATCTTCTGTCTCGTGTTTTCAGTTATCGTCCTCAACAATCCAAACTCTGAACAAGGGCGAATACCTCTCTGTAGAGAACCCGCAAGATGTTCTGCTTTCACCCAGTGGCGTGTTCTCCGCCGGCTTTCAATCCGTTGGTGTTAATGCTTATTGCTTCGCCGTGTGGTTCACCCGCAACCCCACCCTCGTTTGGACGGCGAATCGTGACCAACCAGTTAACGGAAAGCGCTCCAAACTTTCTCTTCTCAAATCTGGAAATCTTCTCTTGACAGATGCTGACGAGTTGGACGTTTGGGCCTCCGACACTTCATCGGCAACCTCTGTTGAGTTGCTTCTCTACGACTCTGGTAATCTTGTTCTCCGAGAAACCAAGGGTGTCGTTTTATGGCAGAGCTTTGATTTCCCTGCCGATACTCTTCTGCCTCACCAACAACTCACCAGATTCACCAAGCTGGTCTCCTCAAGGAGTGAGACAAACCATTCCTCGGGTTTTTATTCTGTGTTTTTCGACAACGACAACGTCCTCCGTCTTCTCTACGACGGTCCTGAAATTTCCAGTATTTATTGGCCGGATCCTGGGCGCGTGAGTTGGCAGAATGGAAGGAGCACTTATAACGGAAGCAGGATTGCGGTGCTCGATTCCTTGGGAAATTTCAGTTCATCGGACCAGTTCAGTTTTATAACTTCCGACTACGGCGCGGTGCTCCAAAGAATGTTGAAAATTGATTCCGACGGTAATGTTCGAGTTTATAGCCAGGAATCTGAAGGACATGAATGGTATGTGTCTTGGCAGGCCATATTAACGCCCTGCTCAATTCATGGAATCTGTGGTGCCAATAGCCTGTGCAGCTATGATCCTGGTGGTTCTGGAAGGAAATGCTCTTGTCTTCCAGGTTTTCGACGCAGGAATTCTAGCGATTGGTCCCTGGGGTGTGAACCAAAACATAATTTCTCTTGCAACCCAAGTGCGTCTTACTTTGTACGTCTTCCCCATGTTGATTTCTACGGCTCTGATCGTCAATTTACCTCAAATTCCACCTTGGAGGATTGTATGAACTTGAATTTGCAATCCTGTGATTACAAGGCCTTCCAGTATAAATTTAGTGAGGATCGCGGCTATTTTAACTGTTTCCCAAAGACCTTCTTGATCAATGGGTATGTTTCACCCGATTTCCAAGCGGGAGTCTACTTGAGACTGCCTAGAGGCAAGCCATTCTCTATGCAAGAATCCCTTCAAGAATCAAGTGCCGAGTGTTCAAACAAAACAATAACAATTGAAAGAGGGTATGTAAAAGCCCATGAAAATAGAAATTTGAAGCTAATGGCTTGGTTTGCTTATAATATAGGAGGGTTTGAGATCCTTTGTATCCTTTGCGTGTGGTGTTTCTTGATGAGAGACCGAAGAAGATCACAGGCCAATGAATGCGCACAAAGCTACCTTCCCATAGGCTCTGGGCTCAAGAAATATAGTTACACTGAGCTTAAAAAGGCGACCAAAGGTTTTTGTCAGGAGATTGGAAGAGGATCAGGTGGGATTGTATACAGGGGTGAATTGTCAGATAATAGAGTTGTGGCAATCAAGAAACTGAGTGAAGCTAGTCAAGGGGAAGAAGAATTTTATGCTGAAGTAAGCAACATTGGAATGCTTAATCACATGAACTTGATTAAAATGTGGGGATACTGCTCAGAGGGGAAGCACAGGCTATTGGTATATGAGTTCATGGAGAATGGTTCTTTAGCTAAAAACCTAGAGTCAAAATCTCACGCTCTAGATTTTAGGACAAGTTTCCACATTGCCCTAGGTGTAGCAAGAGGTCTAGCGTATTTGCATGAGGAATGCTTGGAGTGGATTCTGCACTGTGATGTAAAGCCTCAAAACATACTTTTAGATTCTGATTATCAACCGAAGGTAGCAGATTTTGGGCTATCCAAGCTACTTAAGCGAGATGATTCTGACAATTCAAAGTTCTCAAGAATAAGGGGCACAAGAGGTTATATGGCTCCTGAGTGGGTTTTCAATATGCCTATTACCTCTAAAGTAGATGTTTATAGCTATGGAATTGTGGTGTTGGAGATTATGACTGGGAAGAATCCGATGAAGGGTGGTGACCAAGACATGAATGGCAGTGGAAGAGAAGGAAGGCAACATGGGTTGGTGGGATGGGTGAGGGAGAAAAAGAGCAAAGCATCCTCAAAAGCTTCTTGGTTACAGCAAATAATGCACCCCATGATATGTGGTCATTTGGAGACAAAAAAGATGGAAATTTTGATGGAAGTGGCTTTACAATGTGTAGAAGAAGACAGAGATGCAAGGCCTACCATGAGGCAAGTCGTTGAGATGCTACAAGGTTCGTGTAATTGA 2403 0.4436 MEEFTTVCLLLLIPSSVSCFQLSSSTIQTLNKGEYLSVENPQDVLLSPSGVFSAGFQSVGVNAYCFAVWFTRNPTLVWTANRDQPVNGKRSKLSLLKSGNLLLTDADELDVWASDTSSATSVELLLYDSGNLVLRETKGVVLWQSFDFPADTLLPHQQLTRFTKLVSSRSETNHSSGFYSVFFDNDNVLRLLYDGPEISSIYWPDPGRVSWQNGRSTYNGSRIAVLDSLGNFSSSDQFSFITSDYGAVLQRMLKIDSDGNVRVYSQESEGHEWYVSWQAILTPCSIHGICGANSLCSYDPGGSGRKCSCLPGFRRRNSSDWSLGCEPKHNFSCNPSASYFVRLPHVDFYGSDRQFTSNSTLEDCMNLNLQSCDYKAFQYKFSEDRGYFNCFPKTFLINGYVSPDFQAGVYLRLPRGKPFSMQESLQESSAECSNKTITIERGYVKAHENRNLKLMAWFAYNIGGFEILCILCVWCFLMRDRRRSQANECAQSYLPIGSGLKKYSYTELKKATKGFCQEIGRGSGGIVYRGELSDNRVVAIKKLSEASQGEEEFYAEVSNIGMLNHMNLIKMWGYCSEGKHRLLVYEFMENGSLAKNLESKSHALDFRTSFHIALGVARGLAYLHEECLEWILHCDVKPQNILLDSDYQPKVADFGLSKLLKRDDSDNSKFSRIRGTRGYMAPEWVFNMPITSKVDVYSYGIVVLEIMTGKNPMKGGDQDMNGSGREGRQHGLVGWVREKKSKASSKASWLQQIMHPMICGHLETKKMEILMEVALQCVEEDRDARPTMRQVVEMLQGSCN 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1336 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Prci2g1336 800 PANTHER OS07G0415500 PROTEIN 13 797 - -
Prci2g1336 800 Pfam S-locus glycoprotein domain 237 316 IPR000858 GO:0048544
Prci2g1336 800 FunFam S-receptor-like serine/threonine-protein kinase 481 587 - -
Prci2g1336 800 Pfam D-mannose binding lectin 75 161 IPR001480 -
Prci2g1336 800 CDD B_lectin 34 149 IPR001480 -
Prci2g1336 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 205 IPR036426 -
Prci2g1336 800 PIRSF SRK 1 800 IPR024171 GO:0004674
Prci2g1336 800 Gene3D Phosphorylase Kinase; domain 1 477 587 - -
Prci2g1336 800 ProSiteProfiles Bulb-type lectin domain profile. 21 147 IPR001480 -
Prci2g1336 800 ProSiteProfiles EGF-like domain profile. 280 319 IPR000742 -
Prci2g1336 800 Gene3D Transferase(Phosphotransferase) domain 1 588 800 - -
Prci2g1336 800 SMART serkin_6 513 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1336 800 SMART blect_4 33 149 IPR001480 -
Prci2g1336 800 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Prci2g1336 800 FunFam Putative receptor-like protein kinase 588 800 - -
Prci2g1336 800 Pfam Protein kinase domain 517 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1336 800 SUPERFAMILY Protein kinase-like (PK-like) 496 795 IPR011009 -
Prci2g1336 800 CDD STKc_IRAK 519 797 - -
Prci2g1336 800 CDD EGF 283 318 - -
Prci2g1336 800 ProSiteProfiles Protein kinase domain profile. 513 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1336 800 Gene3D - 22 147 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1336 Prci-Chr2 10037698 10042020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1336 467 798 Receptor kinase-like Gene Family AT1G66910 39.474 1.04e-61 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci2g1336 Pkinase 2.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1336 - - jre:108987254 951.429