Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1326 ATGACCCCGCACTCACGAGAAGATGAGTCTCCAGAAGACGACAAGGACGAAGAAGCCAACCGCTTGCTTCAACCCCAATCTGAATCCCAGACTTCGTCACTGGACGACGACGAGGCCGCTTATGAGGCAGGGGAGAAAATTCTCATAGTAGATTTAAACTCTATCGACGATAAGGATTCGACGACGGTGCCATCTTTCTCGTGGAAGAAGCTATGGCTATTCATGGGACCGGGTTTCTTGATGAGCATAGCTTTTCTGGATCCGGGAAATCTCGAAGGGGATCTCCAGTCTGGAGCCATTGCCGGCTACTCCCTGCTCTGGCTATTGATGTGGGCCACCATCATGGGTTTGATGATCCAGCTTCTTTCCGCAAGGATCGGGGTGGTCACAGGCCGGCACCTGGCGGAGCTGTGCAGAGACGAATATCCTACGTGGGCTAGGTTGGTGCTGTGGTTCATGGCCGAGCTGGCCTTGATTGGTGCTGATATTCAAGAGGTCATTGGGAGTGCCATCGCTATTCAAATTCTTAGCCATGGGGTATTGCCCCTTTGGGCGGGAGTCGTGATTACTGCTTCCGATTGTTTTGTCTTTTTATTTCTTGAGAATTATGGAGTAAGGAAGCTGGAAGCTGTTTTTGCAGTTCTCATTGGGACAATGGCCATTTCTTTTGCCTGGATGTTTGGTGACACCAAACCTAGTGGAAAAGAACTCTTGATGGGTATTTTAGTTCCAAGACTTAGCTCAAAAACAATACGCCAGGCTGTGGGGGTTGTGGGTTGTGTAATAATGCCTCACAACGTGTTCTTGCATTCTGCTTTGGTTCAGTCAAGGGAAGTTGATCTCCGTAAGAAAGGCCAGGTGCAGGAGGCTCTTAAATACTATACCATTGAGTCAACAGTTGCTCTTTCAGTCTCCTTCATCATTAACCTATTTGTCACAACAGTTTTTGCTAAGGGGTTTTACGGTTCAAAGCAGGCCAATAGCATAGGATTGGTTAATGCAGGGCAGTATCTTCAGGAAAAGTATGGAGGAGGGCTCTTCCCAATTCTTTATATATGGGGTATTGGGTTATTGGCAGCTGGACAGAGTAGCACCATTACTGGCACATATGCTGGGCAGTTCATTATGGGAGGTTTTCTCAACCTTCGGCTAAAGAAATGGTTAAGGGCATTAATCACTCGAAGTTGTGCAATTCTGCCAACTATGGTTGTTGCTATTATTTTTAATACATCCGAAGCATCATTGGACATTCTGAATGAGTGGCTGAATGTGCTTCAGTCAATGCAAATTCCGTTTGCACTTATCCCTCTGCTCACCTTGGTCTCTAAAGAGCAGGTCATGGGGACCTTTAGGATTGGACTTGTTCTTGAGAGGGTAGCGTGGACTATTGCTGCGCTGATAATGGTGATCAATGGCTATCTATTGTTAGATTTCTTCCTTTCGGAAGTGAACGGTCTGCTGTTTGGTTTTGTAGTATGCTCCTGCACAGCTGCTTATGTAGCATTCATTGTATATTTGATTTCCCTAAGTGGTGCTCTTCCTTTTTCTTGGGTTACTCTACTTGCCAAGAGATTTCCTTTTTCTGAGATTTGA 1593 0.4608 MTPHSREDESPEDDKDEEANRLLQPQSESQTSSLDDDEAAYEAGEKILIVDLNSIDDKDSTTVPSFSWKKLWLFMGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATIMGLMIQLLSARIGVVTGRHLAELCRDEYPTWARLVLWFMAELALIGADIQEVIGSAIAIQILSHGVLPLWAGVVITASDCFVFLFLENYGVRKLEAVFAVLIGTMAISFAWMFGDTKPSGKELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSREVDLRKKGQVQEALKYYTIESTVALSVSFIINLFVTTVFAKGFYGSKQANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAILPTMVVAIIFNTSEASLDILNEWLNVLQSMQIPFALIPLLTLVSKEQVMGTFRIGLVLERVAWTIAALIMVINGYLLLDFFLSEVNGLLFGFVVCSCTAAYVAFIVYLISLSGALPFSWVTLLAKRFPFSEI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1326 530 PRINTS Natural resistance-associated macrophage protein signature 389 406 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 PRINTS Natural resistance-associated macrophage protein signature 180 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 PRINTS Natural resistance-associated macrophage protein signature 361 380 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 PRINTS Natural resistance-associated macrophage protein signature 150 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 PRINTS Natural resistance-associated macrophage protein signature 205 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 PRINTS Natural resistance-associated macrophage protein signature 254 277 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 PRINTS Natural resistance-associated macrophage protein signature 423 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 Hamap Divalent metal cation transporter MntH [mntH]. 57 479 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 MobiDBLite consensus disorder prediction 1 22 - -
Prci2g1326 530 MobiDBLite consensus disorder prediction 1 38 - -
Prci2g1326 530 Pfam Natural resistance-associated macrophage protein 92 452 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 69 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1326 530 NCBIfam Nramp family divalent metal transporter 76 445 - -
Prci2g1326 530 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 53 508 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1326 Prci-Chr2 9971396 9976268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1326 7 510 Inorganic Solute Cotransporters AT1G47240 79.249 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1326 K21398 - qsa:O6P43_018984 892.493