Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1325 ATGACCCCGCACTCACGAGAAGATGAGTCTCCAGAAGACGACAAGGACGAAGAAGCCAACCGCTTGCTTCAACCCCAATCTGAATCCCAGACTTCGTCACTGGACGACGACGAGGCCGCTTATGAGGCAGGGGAGAAAATTCTCATAGTAGATTTAAACTCTATCGACGATAAGGATTCGACGACGGTGCCATCTTTCTCGTGGAAGAAGCTATGGCTATTCATGGGACCGGGTTTCTTGATGAGCATAGCTTTTCTGGATCCGGGAAATCTCGAAGGGGATCTCCAGTCTGGAGCCATTGCCGGCTACTCCCTGCTCTGGCTATTGATGTGGGCCACCATCATGGGTTTGATGATCCAGCTTCTTTCCGCAAGGATCGGGGTGGTCACAGGCCGGCACCTGGCGGAGCTGTGCAGAGACGAATATCCTACGTGGGCTAGGTTGGTGCTGTGGTTCATGGCCGAGCTGGCCTTGATTGGTGCTGATATTCAAGAGGTCATTGGGAGTGCCATCGCTATTCAAATTCTTAGCCATGGGGTATTGCCCCTTTGGGCGGGAGTCGTGATTACTGCTTCCGATTGTTTTGTCTTTTTATTTCTTGAGAATTATGGAGTAAGGAAGCTGGAAGCTGTTTTTGCAGTTCTCATTGGGACAATGGCCATTTCTTTTGCCTGGATGTTTGGTGACACCAAACCTAGTGGAAAAGAACTCTTGATGGGTATTTTAGTTCCAAGACTTAGCTCAAAAACAATACGCCAGGCTGTGGGGGTTGTGGGTTGTGTAATAATGCCTCACAACGTGTTCTTGCATTCTGCTTTGGTTCAGTCAAGGGAAGTTGATCTCCGTAAGAAAGGCCAGGCCAATAGCATAGGATTGGTTAATGCAGGGCAGTATCTTCAGGAAAAGTATGGAGGAGGGCTCTTCCCAATTCTTTATATATGGGGTATTGGGTTATTGGCAGCTGGACAGAGTAGCACCATTACTGGCACATATGCTGGGCAGTTCATTATGGGAGGTTTTCTCAACCTTCGGCTAAAGAAATGGTTAAGGGCATTAATCACTCGAAGTTGTGCAATTCTGCCAACTATGGTTGTTGCTATTATTTTTAATACATCCGAAGCATCATTGGACATTCTGAATGAGTGGCTGAATGTGCTTCAGTCAATGCAAATTCCGTTTGCACTTATCCCTCTGCTCACCTTGGTCTCTAAAGAGCAGGTCATGGGGACCTTTAGGATTGGACTTGTTCTTGAGAGGGTAGCGTGGACTATTGCTGCGCTGATAATGGTGATCAATGGCTATCTATTGTTAGATTTCTTCCTTTCGGAAGTGAACGGTCTGCTGTTTGGTTTTGTAGTATGCTCCTGCACAGCTGCTTATGTAGCATTCATTGTATATTTGATTTCCCTAAGTGGTGCTCTTCCTTTTTCTTGGGTTACTCTACTTGCCAAGAGATTTCCTTTTTCTGAGATTTGA 1476 0.4654 MTPHSREDESPEDDKDEEANRLLQPQSESQTSSLDDDEAAYEAGEKILIVDLNSIDDKDSTTVPSFSWKKLWLFMGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATIMGLMIQLLSARIGVVTGRHLAELCRDEYPTWARLVLWFMAELALIGADIQEVIGSAIAIQILSHGVLPLWAGVVITASDCFVFLFLENYGVRKLEAVFAVLIGTMAISFAWMFGDTKPSGKELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSREVDLRKKGQANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAILPTMVVAIIFNTSEASLDILNEWLNVLQSMQIPFALIPLLTLVSKEQVMGTFRIGLVLERVAWTIAALIMVINGYLLLDFFLSEVNGLLFGFVVCSCTAAYVAFIVYLISLSGALPFSWVTLLAKRFPFSEI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1325 491 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 53 287 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1325 491 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 69 286 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1325 491 MobiDBLite consensus disorder prediction 1 22 - -
Prci2g1325 491 MobiDBLite consensus disorder prediction 1 38 - -
Prci2g1325 491 Hamap Divalent metal cation transporter MntH [mntH]. 57 440 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1325 491 Pfam Natural resistance-associated macrophage protein 283 413 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1325 491 Pfam Natural resistance-associated macrophage protein 92 281 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1325 491 PRINTS Natural resistance-associated macrophage protein signature 205 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1325 491 PRINTS Natural resistance-associated macrophage protein signature 180 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1325 491 PRINTS Natural resistance-associated macrophage protein signature 150 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1325 491 PRINTS Natural resistance-associated macrophage protein signature 254 277 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci2g1325 491 NCBIfam Nramp family divalent metal transporter 76 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1325 Prci-Chr2 9971396 9976270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1325 7 472 Inorganic Solute Cotransporters AT1G47240 73.176 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1325 K21398 - qsa:O6P43_018984 808.135