Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1308 ATGGATCATTCACTGTCCGGCCTTCTCTGCCAAGAAAACCGAGCAGAGGCGGTGGTAGTGGATGAAGATTTATACGTTCAGTTTGAGGATTCTAATGCTTCAGAGGATGAGTATGTGGACGTTTTAACTGAGAAAGAGATCGGCCTTGGGTTCGGAAGGGACGAGTCTTCGGTGTTGAGTGATTGGATCAAAACTGCTCGCTTGTATGCCATCAATTGGATTCTCAAAACAAGAGCCACTTTCGGCTTTCGCTTTCAGACGGCTTACTTATCTGTCACATACTTCGACCGATTCCTTTCTAGACGGTTCATCGATAGTGAGAGGTGTTGGGCATTTAGGTTACTATCAGTTGCATGCCTTTCTCTGGCTGCCAAGATGGAGGAGTGCGACGTTCCGGCGCTATCAGAATTTCCTTCACAAGATTATAACTTCGAAAGCAAAGTGATTCAGAGAATGGAGCTTTTGGTGCTTTGCACACTGGACTGGAACATGAACTTCACCACTCCTTTTGCATTTTTACCTTATTTCATCCCAAAGTTCAGCAACCAATCCCCTCCGGCTCACATTTGGTCCAACATTATGCAGCTCATCTTCACATTAATGACAGAGGTCAATTTGATGGATCATAGGCCCTCCGTGATAGCAGCGGCGGCTACTCTGGTGGCTATTGATCCGCATTTGACGAGAAAAGCCGTAGAATTGAAGATGAGTTCGGTTTCTCAATATTGGATTCACGAAATTGAAAACATATATGCGAGTTATGATCTAATCCAGAGATTACACATGGAGAAAACTGAAAGAGACAAGATGATGCAATCCTCGAGTCCTCCTTCGCCTGTGGGATCGATGGCAATCAACAAGCTAGAGGCTTCTGTAGTTAGTTCTGCTGTTACGTCCAAGAGAAGAAGACTCACGTTCACTGATCACGAAGAAAGTCGAGGCACACACGACGGAAGTTAA 960 0.451 MDHSLSGLLCQENRAEAVVVDEDLYVQFEDSNASEDEYVDVLTEKEIGLGFGRDESSVLSDWIKTARLYAINWILKTRATFGFRFQTAYLSVTYFDRFLSRRFIDSERCWAFRLLSVACLSLAAKMEECDVPALSEFPSQDYNFESKVIQRMELLVLCTLDWNMNFTTPFAFLPYFIPKFSNQSPPAHIWSNIMQLIFTLMTEVNLMDHRPSVIAAAATLVAIDPHLTRKAVELKMSSVSQYWIHEIENIYASYDLIQRLHMEKTERDKMMQSSSPPSPVGSMAINKLEASVVSSAVTSKRRRLTFTDHEESRGTHDGS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1308 319 SMART Cyclin_C_2 167 291 IPR004367 -
Prci2g1308 319 CDD CYCLIN_AtCycD-like_rpt1 66 162 - -
Prci2g1308 319 ProSitePatterns Cyclins signature. 67 98 IPR006671 -
Prci2g1308 319 CDD CYCLIN_AtCycD-like_rpt2 167 257 - -
Prci2g1308 319 SUPERFAMILY Cyclin-like 36 165 IPR036915 -
Prci2g1308 319 Pfam Cyclin, N-terminal domain 65 165 IPR006671 -
Prci2g1308 319 Gene3D - 160 280 - -
Prci2g1308 319 MobiDBLite consensus disorder prediction 302 319 - -
Prci2g1308 319 Gene3D - 57 159 - -
Prci2g1308 319 PANTHER CYCLINS 36 245 IPR039361 -
Prci2g1308 319 SMART cyclin_7 72 158 IPR013763 -
Prci2g1308 319 MobiDBLite consensus disorder prediction 298 319 - -
Prci2g1308 319 FunFam Cyclin-D5-1 62 165 - -
Prci2g1308 319 Pfam Cyclin, C-terminal domain 168 266 IPR004367 -
Prci2g1308 319 SUPERFAMILY Cyclin-like 150 263 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1308 Prci-Chr2 9822728 9824686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1308 4 250 Core Cell Cycle Gene Families AT4G37630 38.806 9.72e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1308 K18811 - gmx:100798728 345.125