Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1275 ATGAAGTCCATCAATGACAGCAGGAGCAACGATGGGAGTGGGAATAATAATAGTAATGGTCAAAACTGGTTGGGGTTTTCTCTGTCACCCCACATGAAAATGGAGGTTACTTCTGGCCCACCCCTTCATCATCACGATTATCATCAGTATCATCATCAACCTCAAGCTTCTACTGCTGCTGTTTCTAGCTCTGTTCCGACAACCTTCTGTCTGTCACCTTCTCAGCTCAGCAGTTACGGGATATGTTATGGTGCGGCGGAGAACCCAGGCTATCATTCTCCATTGACCGCCATGCCTCTCAAGTCCGATGGCTCGCTTTGTATAATGGAAGCCCTGTCTCGATCACCAACTCAAGTGATGATGCCGAATTCGTCTCCGAAACTGGAGGACTTTCTAGGTGGTGCAACTATGGGGACTCATGATGCAATGGCTCTGAGCCTCGACAGCATCTACTATGGCAACCAGGCTGCACAGGCTCAATCCCATAGAGACCATTCTCTTGATTTTCTTTCGGAGCCTTTCAGACAGCAAGACCCCATATCTGTCCAGTCACATCCTTATTATTCTGGAGCTGCTTGCCATGCTGTTTATCCATCACCATTGGAGCAACAAAGCAAGGACCCCCAATTGCAACCAATGTCCGAGGAAGGCATGACTTGCCTGAAAAACTGGGTGGCTTCCGGCAGGGACTATTCTGCTCAACAAGGTTTGGAGGAGAAGAAAAATGGAACCTTAGAAAATGACAGTGGAGCTTCTGGGTCCGTTGGTAAAGTTGGGTGTGGAGATTTACAGTCCCTTAGTTTATCCGTGAGCCCTGGCTCACAATCTAGCTGTGTAAATGCTCCACAGCGGATTTCCCCCTCTTCGACTGACGTGGTGGCAATGGAAGCCAAGAAGAGAGGGCCAGGGAAGTTGGGCCAGAAACAGCCGGTGCACAGGAAATCGATCGACACTTTTGGCCAAAGAACGTCTCAGTACCGAGGCGTCACAAGGCACAGATGGACCGGTAGATATGAAGCGCATTTATGGGATAACAGTTGTAAGAAGGAAGGGCAGACCAGGAAAGGAAGACAAGTTTATTTGGGGGGCTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTTGCTGCCCTCAAGTACTGGGGAGCCTCAACCCATATTAACTTTCCGTTGGAAAATTACCAGGTTGAACTTGAAGAAATGAAGAACATGAGCAGGCAAGAATACGTTGCCCACTTGAGAAGAAAAAGCAGTGGTTTTTCCAGAGGGGCTTCAATGTATAGAGGAGTGACGAGGCACCATCAACATGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCAGGAAACAAGGACCTCTATCTGGGAACATTCAGCACTCAGGAGGAAGCAGCTGAAGCGTATGACATAGCTGCAATCAAGTTTCGAGGCGTGAATGCAGTTACTAACTTCGACATATCAAGATACGATGTGGAAAGGATCATGGCGAGCAACACCCTTCTCGCTGGTGAGCTGGCTCGACGAAACAAAGATAGCGAGCCAAGAATAGAAGCCATGGAGTACAATGTAGCCTCGAACCAGAGCAATGGGGTAGCGGTTCAAGCTCAAAGGAACGACAACGGCAACGGCTCGGAGTGGAAAATGTATCATCCAAACAGCTGTGAGCAGAAAACCGTGAACTGCGGAAATTACAGGAATTCAGCCATATCTGTGGCCCTACAGGATCTCATTGGGATTGACTCAGAAAGCTCGGGTCAGGCCATGCTGGAGGACACTACCAAGATAGGCACTCATTTTTCAAACCCAACCTCGCTGGTCACGAGTCTGAGCAGCTCAAGAGAGGGAAGCCCGGATAAAACTGGTCCCACCATTCTGTTTCCAAAGCCTCCTCCAATGGCTTCAAAGATTGTTGGCCCCATAGGTAGTGGAGTTAGCTCGTGGTTCCCTTCAGCAGCTTCTCAAACGTTGAGGCCAGCTCCTGCTCTTTCGATGTCTCACTTGCCAGTTTTTGCAGCTTGGAACGATGGTTGA 2031 0.4889 MKSINDSRSNDGSGNNNSNGQNWLGFSLSPHMKMEVTSGPPLHHHDYHQYHHQPQASTAAVSSSVPTTFCLSPSQLSSYGICYGAAENPGYHSPLTAMPLKSDGSLCIMEALSRSPTQVMMPNSSPKLEDFLGGATMGTHDAMALSLDSIYYGNQAAQAQSHRDHSLDFLSEPFRQQDPISVQSHPYYSGAACHAVYPSPLEQQSKDPQLQPMSEEGMTCLKNWVASGRDYSAQQGLEEKKNGTLENDSGASGSVGKVGCGDLQSLSLSVSPGSQSSCVNAPQRISPSSTDVVAMEAKKRGPGKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGASTHINFPLENYQVELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKDSEPRIEAMEYNVASNQSNGVAVQAQRNDNGNGSEWKMYHPNSCEQKTVNCGNYRNSAISVALQDLIGIDSESSGQAMLEDTTKIGTHFSNPTSLVTSLSSSREGSPDKTGPTILFPKPPPMASKIVGPIGSGVSSWFPSAASQTLRPAPALSMSHLPVFAAWNDG 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1275 676 MobiDBLite consensus disorder prediction 604 630 - -
Prci2g1275 676 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 118 556 - -
Prci2g1275 676 MobiDBLite consensus disorder prediction 604 618 - -
Prci2g1275 676 ProSiteProfiles AP2/ERF domain profile. 427 485 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 ProSiteProfiles AP2/ERF domain profile. 325 391 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 MobiDBLite consensus disorder prediction 1 24 - -
Prci2g1275 676 FunFam AP2-like ethylene-responsive transcription factor ANT 324 393 - -
Prci2g1275 676 CDD AP2 324 391 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 Gene3D AP2/ERF domain 324 393 IPR036955 GO:0003700|GO:0006355
Prci2g1275 676 Gene3D AP2/ERF domain 427 487 IPR036955 GO:0003700|GO:0006355
Prci2g1275 676 Pfam AP2 domain 428 477 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 Pfam AP2 domain 325 383 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 CDD AP2 426 487 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 MobiDBLite consensus disorder prediction 271 292 - -
Prci2g1275 676 SUPERFAMILY DNA-binding domain 426 487 IPR016177 GO:0003677
Prci2g1275 676 SMART rav1_2 325 397 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 SMART rav1_2 427 491 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 PRINTS Ethylene responsive element binding protein signature 467 487 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 PRINTS Ethylene responsive element binding protein signature 326 337 IPR001471 GO:0003700|GO:0006355
Prci2g1275 676 FunFam AP2-like ethylene-responsive transcription factor 426 487 - -
Prci2g1275 676 SUPERFAMILY DNA-binding domain 324 393 IPR016177 GO:0003677
Prci2g1275 676 MobiDBLite consensus disorder prediction 271 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1275 Prci-Chr2 9545084 9549384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1275 11 512 AP2-EREBP Transcription Factor Family AT4G37750 53.019 1.54e-160 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Prci2g1275 AP2 3.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1275 K09285 - qsa:O6P43_015953 917.531