Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1262 ATGGGGAGGGCTCCGTGCTGCGACAAAGCAAACGTGAAGAAAGGACCTTGGTCCCCAGAAGAAGATGCCAAACTCAAGTCCTACATTGAACAGCATGGCACTGGTGGAAACTGGATCGCTTTGCCTCAAAAGATCGGGCTAAAGAGATGTGGGAAGAGTTGTCGACTGAGGTGGTTAAACTATCTTCGACCAAATATCAAACATGGGGGTTTCTCCGAAGAAGAAGACAACATTATTTGCAGCCTCTACGTCAGTATTGGAAGCAGGTGGTCGGTGATTGCAGCACAATTGCCAGGAAGAACAGACAACGACATAAAGAACTACTGGAACACTAAACTGAAGAAGAAGCTTCTGGGTAATAAGCACCGTAAAGATCAACAATCACGTAGTAAAAGCAAGCAGGAAGGAGCTAATAGGATCACCTCTTCCAATTCCTTTCTAGTTCCTGAAAATTCTGCAAACACTACTTTTCCACAACTATATTGGCCACCACACATGCCTGTGATATCTCCCTTGCAATACTCAAATCAAGACCCATGTTTCAACGATCAAGATTCCATCAAAAAATTGCTCCTCAAACTGGGAGGAAGATTTTCCGACGAGGATGATCACGATTATCACCCTACCCTCGATGCTTTGAATATTAACCCCAATCTATTCTCAGATGGTACTCCCTGCACTCAACCAGTTTGTGAAGAACAAGCAAATATGGCTGCTTCTTCTTCTAGCATGATCAATAACGGAACAATGGTTAACAGCAACCAGATAGAATTGGCCCGAGAGACAGGACTTGAGGAGATAATAGTATGCAGTAATAATACTTATGCTTATCCACAAAGATTAGATGGACTGGAACTATTGTTTGGGGACGACATGGTGATGGTCAATGAAAAGGTAGCCCCACCTGAAGATACCAACTCGCTCGTTTATCAATCTTTTATTCCTTCCAATAACCAGTTCATGCCACAACACACACCACAACAATGTGCTTTCCCAGATTTAAGGTTTAACCGGCCATAA 1020 0.4324 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTKLKKKLLGNKHRKDQQSRSKSKQEGANRITSSNSFLVPENSANTTFPQLYWPPHMPVISPLQYSNQDPCFNDQDSIKKLLLKLGGRFSDEDDHDYHPTLDALNINPNLFSDGTPCTQPVCEEQANMAASSSSMINNGTMVNSNQIELARETGLEEIIVCSNNTYAYPQRLDGLELLFGDDMVMVNEKVAPPEDTNSLVYQSFIPSNNQFMPQHTPQQCAFPDLRFNRP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1262 339 Gene3D - 7 68 - -
Prci2g1262 339 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Prci2g1262 339 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Prci2g1262 339 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Prci2g1262 339 PANTHER OS09G0431300 PROTEIN 1 255 - -
Prci2g1262 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Prci2g1262 339 CDD SANT 71 111 IPR001005 -
Prci2g1262 339 CDD SANT 16 62 IPR001005 -
Prci2g1262 339 FunFam Transcription factor MYB36 70 139 - -
Prci2g1262 339 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Prci2g1262 339 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Prci2g1262 339 FunFam Transcription factor RAX3 7 68 - -
Prci2g1262 339 Gene3D - 70 142 - -
Prci2g1262 339 MobiDBLite consensus disorder prediction 119 145 - -
Prci2g1262 339 SMART sant 13 64 IPR001005 -
Prci2g1262 339 SMART sant 67 115 IPR001005 -
Prci2g1262 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1262 Prci-Chr2 9404124 9405835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1262 1 208 MYB Transcription Factor Family AT3G49690 61.395 9.17e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci2g1262 Myb_DNA-binding 2.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1262 K09422 - gmx:778079 350.132