Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1255 ATGGTGATCGGAGAACTAGCTTGTTTGGCCCCGAACTTTCAGACTTCTCATTCGAAGTCGCTCGATGGTTCAACCATAGCATTGCCCATCGATGGTTTGGCTACCAACATAAATGGCAATACCGCTGGCTGCGATTATCCACCTTCCATCGATTCCTCGCCCGCCCTCCACCCTTTCCTTTCCAATGAAAGTGGTCTCACTCCCATTGATCTGGATTCGCTCTGCGAAGATTTTGACGCTTCTTTTGACGCTTTTTCCAGCGATCAGTTCCGCATCTTCGAGTTTAAGATCCGCAAATGCGCGCGTTCCCGGTCACATGACTGGACGGAGTGTCCGTACGCCCACCCCAGCGAGAAGGCTCGCCGGAGAGATCCTCGGAAATATCACTACTCCGGCACCGCATGTCCCGAGTTTCGCAAAGGTAACTGCAAGAAAGGTGACTCGTGCGAGTTTTCTCATGGGGTGTTTGAATGCTGGCTCCACCCCTCTCGCTACAGGACCCAGTTCTGCAAGGACGGAACAAATTGTCGCCGCCGGGTGTGCTTCTTCGCTCATACTCCTGAACAGTTGCGGTTCCTCGCTAACGGGTCGGGCGAATCATTGGAGGGATCGCCGATTTGTCACGCTTCCTTCGTTTCATCGCCGACATCTGTACTCCAACCGTCGCCGATCTCTTCATTAGCCGAGTCCCCACCCACATCGCCCCGAAATCCCCGACACGGCGGGATTGAAGTAAGCGGCTCCATGCGTAATGTTCAAAGTGATAAGCCGCCTCCAACTCGTGTTCTCTTCATGCGCGATGGGTTCGGTTCACCTCACGGGATCCATACGGGTTTGGTGCTTGGTTCGCCCCGTGGTTCGAATCTCCGACCTGGGTGTTTTAGCCCCGCATCGACTACGACTCGGACAATAACGAGATCTGGGCTTAGCACCGTGGACAAGTGGGATCAAAGCTGCCAAGAAGAACCCGCCATGGAAAGGGTCGAATCTGGAAGAGAACTTAGAGCCAAAATGTACGCTAGGCTCTGTAAGGAGAACTCATTCGGGAGGAGCAACGCGCAGTTTTCTGGAGTGTTCTGA 1080 0.5389 MVIGELACLAPNFQTSHSKSLDGSTIALPIDGLATNINGNTAGCDYPPSIDSSPALHPFLSNESGLTPIDLDSLCEDFDASFDAFSSDQFRIFEFKIRKCARSRSHDWTECPYAHPSEKARRRDPRKYHYSGTACPEFRKGNCKKGDSCEFSHGVFECWLHPSRYRTQFCKDGTNCRRRVCFFAHTPEQLRFLANGSGESLEGSPICHASFVSSPTSVLQPSPISSLAESPPTSPRNPRHGGIEVSGSMRNVQSDKPPPTRVLFMRDGFGSPHGIHTGLVLGSPRGSNLRPGCFSPASTTTRTITRSGLSTVDKWDQSCQEEPAMERVESGRELRAKMYARLCKENSFGRSNAQFSGVF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1255 359 ProSiteProfiles Zinc finger C3H1-type profile. 130 156 IPR000571 GO:0046872
Prci2g1255 359 PANTHER UNKEMPT FAMILY MEMBER 52 353 IPR045234 -
Prci2g1255 359 MobiDBLite consensus disorder prediction 220 257 - -
Prci2g1255 359 FunFam Zinc finger CCCH domain-containing protein 66 87 155 - -
Prci2g1255 359 SMART c3hfinal6 164 187 IPR000571 GO:0046872
Prci2g1255 359 SMART c3hfinal6 129 155 IPR000571 GO:0046872
Prci2g1255 359 Pfam CCCH-type zinc finger 135 154 IPR041367 -
Prci2g1255 359 Gene3D - 130 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1255 Prci-Chr2 9322347 9323764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1255 85 231 C2H2 Transcription Factor Family AT5G12850 57.143 7.01e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci2g1255 zf-CCCH 2e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1255 - - cave:132185767 381.719