Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1236 ATGGGCAGGAAATGCTCGTACTGTGGAAACCTGGGTCACAATTCGAGGACTTGTAATATTATTCAGAGAGGTGGCCTTGATGGTGTTGGTGGTGGCCTCAAGATCTTCGGGGTGCAATTATTTGATCCTCTTCCTCCTCTTCCTTCTTCTTCACCTACTAGTTACGGTCATGGCATGAAAGGAAGTTTCAGCTTGGACTGCTTGCCGTCTTCCCAGAACGCCTTCATGCCTACCACTTCTCCCTCCTCCTCCTCCTGCTCCTCACGTTCTCTGCTTGAACTCAACGACAATTCAGATCATAAAATGTCTGATTCTTATCTAGCCGGAACCCTAAGGAAGAATAAAGGAGTGCCATGGACGGAGGAGGAGCACCGGATATTTCTGACAGGGCTGAAGAAGCTGGGGAAGGGTGACTGGAGAGGCATCTCTAAGAACTTTGTGACAACAAGAACACCAACCCAAGTGGCCAGTCATGCACAGAAATATTTCCTCCGTCAGAATCACGCCAAGAAAAGAAAGCGCTATCAAACCCTCCTTCATGTGGTGGGGGGACAGAATAATAACACAGTGAAAGCAGTAACAAATTCTTGCTCAGCTGTTGGTGCTTCTGAGACTATGAACATGGATGTCGGTTGCAGCAGCCACAGCAATAGCACAAGGATGTGTCTCTCACGGTGGCTTTCAAGTTATCATTCAGTGCTTAATTGGGCTGCCTCTTCACCAAAGTGCGCTACTTTTCAAGGCTTAGAACCTGATTTAGAACTCAAACTAGCGACTCCGCGCCTTCTTTAA 792 0.476 MGRKCSYCGNLGHNSRTCNIIQRGGLDGVGGGLKIFGVQLFDPLPPLPSSSPTSYGHGMKGSFSLDCLPSSQNAFMPTTSPSSSSCSSRSLLELNDNSDHKMSDSYLAGTLRKNKGVPWTEEEHRIFLTGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQNHAKKRKRYQTLLHVVGGQNNNTVKAVTNSCSAVGASETMNMDVGCSSHSNSTRMCLSRWLSSYHSVLNWAASSPKCATFQGLEPDLELKLATPRLL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1236 263 ProSiteProfiles Myb-like domain profile. 118 163 IPR001005 -
Prci2g1236 263 FunFam transcription factor MYB1R1 117 168 - -
Prci2g1236 263 SUPERFAMILY Homeodomain-like 113 168 IPR009057 -
Prci2g1236 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 115 167 IPR017930 -
Prci2g1236 263 SMART sant 115 165 IPR001005 -
Prci2g1236 263 CDD SANT 118 163 IPR001005 -
Prci2g1236 263 Pfam Myb-like DNA-binding domain 118 163 IPR001005 -
Prci2g1236 263 NCBIfam myb-like DNA-binding domain, SHAQKYF class 114 166 IPR006447 GO:0003677
Prci2g1236 263 ProSiteProfiles SANT domain profile. 119 167 IPR017884 -
Prci2g1236 263 PANTHER TRANSCRIPTION FACTOR KUA1 3 202 - -
Prci2g1236 263 Gene3D - 119 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1236 Prci-Chr2 9183378 9184562 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci2g1236 Myb_DNA-binding 5.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1236 - - pcin:129304081 499.59