Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1222 ATGATTCCTGTTGCTATGAACCCACCAAGCCCTTTCCTTCTCAAGGATCAAATAGAAGATCAGCACCAATTCTTCGTTTCTCCTCATAATCGGGATTCGTCAAGTGATTCTCTCTCGTCGTGTCCCAGTTTCTTCCACATACTTGATCCAACACAGACTAGAGAAACCCCAGAGTTAAGACGTGATCAAGAGGAGAATGGACTGGTGGTGCACGGTAGATCAAGCTGCAGTCACCAAGCTTGTAATTCATCCTTCAATTCACCCCAGACTCAACAAGTTAAGGATGATCGAAGAAACGCGTGTGGCTATAAAGAGGAAGAGGAAGAAGAAAGCACAAAAAGCGGATTCGAGTCTGCACAATGGATGTCTTCTAAGATGAGGTTAATGCCAAAAATGATCCCCAGCACTACCAGTCCTGTCCCTCACAAAGCATCGAATATTACTACAAATATCCGAACTCAAGAGCACCAGAAAACCCAAACCCAAAGAAGACCTTCAAACCACAGAAATAGCACAGCCATTAGGGTTTGTGCCGACTGTAACACAACCAGCACCCCACTTTGGAGGGGTGGCCCAAATGGTCCTAAGTCACTGTGCAATGCATGTGGGATTCGGCGGAGGAAGGCAAGAAGGGCTTTAATGGCGGAAGCTGGAAATGGTGCAGCGACTTGCAGATTAAATAGCAAGGAAAAGAAGGCTCGCACAAACCACTTTATAGCATTAAAGAATAAGTGCAAGGCGACGGCAAGCAACGCAGGGACGTCTCAGCAGAGAGAAAAGAAGAATATGGGTTTTAAGGATTTTGCATTTAGTTTCAGGAACAACGTGTCGGTGGTTGAGCAAGTGTTTCCGCCGGACGAAGTAGCTCAAGCGGCACTGCTTCTCATGGATTTATCTTATGCCTCTGTTCCTATTTAG 918 0.4597 MIPVAMNPPSPFLLKDQIEDQHQFFVSPHNRDSSSDSLSSCPSFFHILDPTQTRETPELRRDQEENGLVVHGRSSCSHQACNSSFNSPQTQQVKDDRRNACGYKEEEEEESTKSGFESAQWMSSKMRLMPKMIPSTTSPVPHKASNITTNIRTQEHQKTQTQRRPSNHRNSTAIRVCADCNTTSTPLWRGGPNGPKSLCNACGIRRRKARRALMAEAGNGAATCRLNSKEKKARTNHFIALKNKCKATASNAGTSQQREKKNMGFKDFAFSFRNNVSVVEQVFPPDEVAQAALLLMDLSYASVPI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1222 305 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 172 217 - -
Prci2g1222 305 CDD ZnF_GATA 176 208 IPR000679 GO:0006355|GO:0043565
Prci2g1222 305 Gene3D - 172 216 IPR013088 GO:0006355|GO:0008270
Prci2g1222 305 ProSiteProfiles GATA-type zinc finger domain profile. 171 207 IPR000679 GO:0006355|GO:0043565
Prci2g1222 305 SMART GATA_3 171 223 IPR000679 GO:0006355|GO:0043565
Prci2g1222 305 MobiDBLite consensus disorder prediction 77 96 - -
Prci2g1222 305 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 5 301 - -
Prci2g1222 305 ProSitePatterns GATA-type zinc finger domain. 177 202 IPR000679 GO:0006355|GO:0043565
Prci2g1222 305 Pfam GATA zinc finger 177 210 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1222 Prci-Chr2 9109391 9111291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1222 114 303 C2C2-Gata Transcription Factor Family AT4G26150 32.110 1.11e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci2g1222 GATA 1.5e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1222 - - pcin:129298038 612.838