Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1192 ATGTTGTCAAAGGAATTTCAGACTTTGCAAACCATCATCACATCAACAGTATCGTTATCGGCGCAACGGCCAGCTGGAACTCTCTGGCAAGGTTTTGATCTGCCAACGGCCATAATCAAGTCAGCTCCAGATTATACTTCTGTGTATGTAATTTCAAAAGGGAAGATAGTCTCAGCTCGATCAGCACTGCGTCCTATGTCAAATATTTTTGCCCCGTCAAAACAACCGCTGGCACTTCAACCAAATGATGTAGAAAACGGAGTAAGGGGTTTGGCTGCAAACAGGGCACAGGCAGCTAAAAGAGGAGGGATGACAGAGGGATCAGAAAGAACGTCTTCTGAGACGAACAAGAATCGAGCAAGGGAAAAGAGTTCCGGCAGTTCGTCGATGGATAAAATCGACCTACCCAGTCGTGGGCTGAAGCCATCAGTTGGCCCTGATTCTTTTTCGGACGAAAGTGTTTCATCGGATCTAACTAAACAAGATTTGGTGTTTAGCTTTTCATCTGATGGCTCCAGGACATCATCATCCTCCCAACCATCGAAAGAACTAGAAGCTGAAATGAAGAGATTGAGGCTTGAATTGAAGCAAACCATGGACATGTACAGCTCAGCTTGCAAAGAGGCAATCTCAGCAAAAAATAAGGCTGACGAGATTAATCAATGGAAACTAGAGGAGGCACGTAAACTTGAGGAAGCAATATTGTCAGGAGAGGCAGCTCTTGCACTGGCAGAAAAGGAGAAGGCTAGAGCCAGAGCTGCCATTGAAGAAGCTGAGGAAGCCAAGAAAATGGCTGAGAAGGAAGCAGAGAGAAGGAGACATGCAGAGATAAAGGCCAGGAAAGAAGCAGCAGAAAAGGACCGAGCATTAACTGCTTTGGCTAAAAATGATGTTCGATATAGAAAATACACAATAGAGGAGATCGAAAAAGCTACTGAAAAGTTCTCCCCTTCCTTGAAAATAGGTGAAGGTGGATATGGGCCTGTGTTTAAAGGTGAACTTGATCACACCCCAGTTGCGATCAAAATCTTAAGACCTGATGCTGCTCAGGGCAGGAAGCAGTTTCAGCAGGAGGTTGAGGTATTATGCTGCATTAGACATCCCAATATGGTCCTCCTCCTCGGTGCGTGTCCTGATTATGGGTGTTTGGTGTATGAATACATGGAGAATGGTAGCTTAGAAGATAGATTATTTCGGAAGAATAATAGCCCGCCTCTTTCATGGAGGTTAAGGTTTACAATAGCTGCTGAAATAGCAACTGCACTTCTTTTCCTTCACCAAAGCAAGCCAGAACCCCTTGTGCATCGGGACCTAAAACCAGCCAACATTCTCCTAGACCGAAATTATGTGAGTAAAATCAGTGATGTGGGCCTGGCACGATTGGTTCCGCCTTCTGTAGCTGATTCTGTCACACAATATTACATGACTGCAGCTGCCGGGACCTTTTGCTACATTGATCCTGAGTATCAACAAACAGGAAAGTTAACGACTAAATCGGATGTATATTCATTGGGGATAATGCTACTGCAAGTTGTCACAGCTAGGCCTCCCATGGGTCTTTCTCACCAGGTCAAAAGGGCAATTGAAAAAGGAAGATTTTCAGAGATGCTTGATCCTACGGTGACTGATTGGCCAGTTAAAGAGGCTCTAGCATTTGCCAAAGTGGCAGTGAGTTGCGCAGAGCTTAGCAAGAAGGACAGGCCTGATCTTGCAACAGTTGTAGTGCCAGAGCTTAACCGCTTAAGGAATTTTGGTTTGACGTCTCACCCTAGCTAG 1776 0.4516 MLSKEFQTLQTIITSTVSLSAQRPAGTLWQGFDLPTAIIKSAPDYTSVYVISKGKIVSARSALRPMSNIFAPSKQPLALQPNDVENGVRGLAANRAQAAKRGGMTEGSERTSSETNKNRAREKSSGSSSMDKIDLPSRGLKPSVGPDSFSDESVSSDLTKQDLVFSFSSDGSRTSSSSQPSKELEAEMKRLRLELKQTMDMYSSACKEAISAKNKADEINQWKLEEARKLEEAILSGEAALALAEKEKARARAAIEEAEEAKKMAEKEAERRRHAEIKARKEAAEKDRALTALAKNDVRYRKYTIEEIEKATEKFSPSLKIGEGGYGPVFKGELDHTPVAIKILRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPDYGCLVYEYMENGSLEDRLFRKNNSPPLSWRLRFTIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYYMTAAAGTFCYIDPEYQQTGKLTTKSDVYSLGIMLLQVVTARPPMGLSHQVKRAIEKGRFSEMLDPTVTDWPVKEALAFAKVAVSCAELSKKDRPDLATVVVPELNRLRNFGLTSHPS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1192 591 Gene3D Transferase(Phosphotransferase) domain 1 388 585 - -
Prci2g1192 591 PANTHER OS02G0152300 PROTEIN 12 587 - -
Prci2g1192 591 Gene3D Phosphorylase Kinase; domain 1 293 387 - -
Prci2g1192 591 Coils Coil 227 287 - -
Prci2g1192 591 Pfam Protein tyrosine and serine/threonine kinase 320 574 IPR001245 GO:0004672|GO:0006468
Prci2g1192 591 MobiDBLite consensus disorder prediction 112 128 - -
Prci2g1192 591 SMART serkin_6 315 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1192 591 MobiDBLite consensus disorder prediction 95 155 - -
Prci2g1192 591 Coils Coil 181 201 - -
Prci2g1192 591 SUPERFAMILY Protein kinase-like (PK-like) 299 574 IPR011009 -
Prci2g1192 591 ProSiteProfiles Protein kinase domain profile. 315 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1192 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Prci2g1192 591 FunFam U-box domain-containing protein 51 388 588 - -
Prci2g1192 591 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 288 387 - -
Prci2g1192 591 CDD STKc_IRAK 321 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1192 Prci-Chr2 8895131 8898552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1192 33 590 Receptor kinase-like Gene Family AT5G12000 62.478 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci2g1192 PK_Tyr_Ser-Thr 4.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1192 - - cave:132184791 681.404