Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1191 ATGCCTTCCGGTGGGCACTTAATCATCTCGATAGTCCAATCATCGTCGCTCTCCACGTTGGGCCAAAACACATTCCATCCCGTAGATGAGGCTCTCAAGGTATTTCCCCCTGATGAAAGCGATGTAGCCAATGTTTTCTCTGCATTACGAGAAGTACGTACACATAAAGTGGTGACGATTAAAGAAGCCGTAGTTGACGATAGTGATGTTGTCAAAGGAATTTCAGACTTTGCAAACCATCATCACATCAACAGTATCGTTATCGGCGCAACGGCCAGCTGGAACTCTCTGGCAAGGAAATTTATAGGTTTTGATCTGCCAACGGCCATAATCAAGTCAGCTCCAGATTATACTTCTGTGTATGTAATTTCAAAAGGGAAGATAGTCTCAGCTCGATCAGCACTGCGTCCTATGTCAAATATTTTTGCCCCGTCAAAACAACCGCTGGCACTTCAACCAAATGATGTAGAAAACGGAGTAAGGGGTTTGGCTGCAAACAGGGCACAGGCAGCTAAAAGAGGAGGGATGACAGAGGGATCAGAAAGAACGTCTTCTGAGACGAACAAGAATCGAGCAAGGGAAAAGAGTTCCGGCAGTTCGTCGATGGATAAAATCGACCTACCCAGTCGTGGGCTGAAGCCATCAGTTGGCCCTGATTCTTTTTCGGACGAAAGTGTTTCATCGGATCTAACTAAACAAGATTTGGTGTTTAGCTTTTCATCTGATGGCTCCAGGACATCATCATCCTCCCAACCATCGAAAGAACTAGAAGCTGAAATGAAGAGATTGAGGCTTGAATTGAAGCAAACCATGGACATGTACAGCTCAGCTTGCAAAGAGGCAATCTCAGCAAAAAATAAGGCTGACGAGATTAATCAATGGAAACTAGAGGAGGCACGTAAACTTGAGGAAGCAATATTGTCAGGAGAGGCAGCTCTTGCACTGGCAGAAAAGGAGAAGGCTAGAGCCAGAGCTGCCATTGAAGAAGCTGAGGAAGCCAAGAAAATGGCTGAGAAGGAAGCAGAGAGAAGGAGACATGCAGAGATAAAGGCCAGGAAAGAAGCAGCAGAAAAGGACCGAGCATTAACTGCTTTGGCTAAAAATGATGTTCGATATAGAAAATACACAATAGAGGAGATCGAAAAAGCTACTGAAAAGTTCTCCCCTTCCTTGAAAATAGGTGAAGGTGGATATGGGCCTGTGTTTAAAGGTGAACTTGATCACACCCCAGTTGCGATCAAAATCTTAAGACCTGATGCTGCTCAGGGCAGGAAGCAGTTTCAGCAGGAGGTTGAGGTATTATGCTGCATTAGACATCCCAATATGGTCCTCCTCCTCGGTGCGTGTCCTGATTATGGGTGTTTGGTGTATGAATACATGGAGAATGGTAGCTTAGAAGATAGATTATTTCGGAAGAATAATAGCCCGCCTCTTTCATGGAGGTTAAGGTTTACAATAGCTGCTGAAATAGCAACTGCACTTCTTTTCCTTCACCAAAGCAAGCCAGAACCCCTTGTGCATCGGGACCTAAAACCAGCCAACATTCTCCTAGACCGAAATTATGTGAGTAAAATCAGTGATGTGGGCCTGGCACGATTGGTTCCGCCTTCTGTAGCTGATTCTGTCACACAATATTACATGACTGCAGCTGCCGGGACCTTTTGCTACATTGATCCTGAGTATCAACAAACAGGAAAGTTAACGACTAAATCGGATGTATATTCATTGGGGATAATGCTACTGCAAGTTGTCACAGCTAGGCCTCCCATGGGTCTTTCTCACCAGGTCAAAAGGGCAATTGAAAAAGGAAGATTTTCAGAGATGCTTGATCCTACGGTGACTGATTGGCCAGTTAAAGAGGCTCTAGCATTTGCCAAAGTGGCAGTGAGTTGCGCAGAGCTTAGCAAGAAGGACAGGCCTGATCTTGCAACAGTTGTAGTGCCAGAGCTTAACCGCTTAAGGAATTTTGGTTTGACGTCTCACCCTAGCTAG 1992 0.4518 MPSGGHLIISIVQSSSLSTLGQNTFHPVDEALKVFPPDESDVANVFSALREVRTHKVVTIKEAVVDDSDVVKGISDFANHHHINSIVIGATASWNSLARKFIGFDLPTAIIKSAPDYTSVYVISKGKIVSARSALRPMSNIFAPSKQPLALQPNDVENGVRGLAANRAQAAKRGGMTEGSERTSSETNKNRAREKSSGSSSMDKIDLPSRGLKPSVGPDSFSDESVSSDLTKQDLVFSFSSDGSRTSSSSQPSKELEAEMKRLRLELKQTMDMYSSACKEAISAKNKADEINQWKLEEARKLEEAILSGEAALALAEKEKARARAAIEEAEEAKKMAEKEAERRRHAEIKARKEAAEKDRALTALAKNDVRYRKYTIEEIEKATEKFSPSLKIGEGGYGPVFKGELDHTPVAIKILRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPDYGCLVYEYMENGSLEDRLFRKNNSPPLSWRLRFTIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYYMTAAAGTFCYIDPEYQQTGKLTTKSDVYSLGIMLLQVVTARPPMGLSHQVKRAIEKGRFSEMLDPTVTDWPVKEALAFAKVAVSCAELSKKDRPDLATVVVPELNRLRNFGLTSHPS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1191 663 FunFam U-box domain-containing protein 51 460 660 - -
Prci2g1191 663 SMART serkin_6 387 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1191 663 MobiDBLite consensus disorder prediction 167 227 - -
Prci2g1191 663 ProSiteProfiles Protein kinase domain profile. 387 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1191 663 Coils Coil 253 273 - -
Prci2g1191 663 SUPERFAMILY Protein kinase-like (PK-like) 371 646 IPR011009 -
Prci2g1191 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Prci2g1191 663 CDD STKc_IRAK 393 653 - -
Prci2g1191 663 PANTHER OS02G0152300 PROTEIN 37 659 - -
Prci2g1191 663 Gene3D Transferase(Phosphotransferase) domain 1 460 657 - -
Prci2g1191 663 Coils Coil 299 359 - -
Prci2g1191 663 Gene3D Phosphorylase Kinase; domain 1 365 459 - -
Prci2g1191 663 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 360 459 - -
Prci2g1191 663 MobiDBLite consensus disorder prediction 184 200 - -
Prci2g1191 663 Pfam Protein tyrosine and serine/threonine kinase 392 646 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1191 Prci-Chr2 8894975 8898552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1191 60 662 Receptor kinase-like Gene Family AT5G12000 60.064 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci2g1191 PK_Tyr_Ser-Thr 5.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1191 - - cave:132184791 717.613