LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g1190	ATGGGTTCCACTTCCATCCTCAGAGCAAGAGGTGGCAACAAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTTTGCAATAGCGGTGGAGGCGGTGGTGGCAGCTGTGGCGAGCAAAACCTAATCATGTCTATCCACCAGCCGTTTGATGGCAGAGCACTGCCTCTAAACACCACCGTGGTGCCCGTCGACAAAGGCAAGACCAGCGTGTATGCCTTCCGGTGGGCACTTAATCATCTCGATAGTCCAATCATCGTCGCTCTCCACGTTGGGCCAAAACACATTCCATCCCATGAGGCTCTCAAGGTATTTCCCCCTGATGAAAGCGATGTAGCCAATGTTTTCTCTGCATTACGAGAAGTACGTACACATAAAGTGGTGACGATTAAAGAAGCCGTAGTTGACGATAGTGATGTTGTCAAAGGAATTTCAGACTTTGCAAACCATCATCACATCAACAGTATCGTTATCGGCGCAACGGCCAGCTGGAACTCTCTGGCAAGGAAATTTATAGGTTTTGATCTGCCAACGGCCATAATCAAGTCAGCTCCAGATTATACTTCTGTGTATGTAATTTCAAAAGGGAAGATAGTCTCAGCTCGATCAGCACTGCGTCCTATGTCAAATATTTTTGCCCCGTCAAAACAACCGCTGGCACTTCAACCAAATGATGTAGAAAACGGAGTAAGGGCACAGGCAGCTAAAAGAGGAGGGATGACAGAGGGATCAGAAAGAACGTCTTCTGAGACGAACAAGAATCGAGCAAGGGAAAAGAGTTCCGGCAGTTCGTCGATGGATAAAATCGACCTACCCAGTCGTGGGCTGAAGCCATCAGTTGGCCCTGATTCTTTTTCGGACGAAAGTGTTTCATCGGATCTAACTAAACAAGATTTGGTGTTTAGCTTTTCATCTGATGGCTCCAGGACATCATCATCCTCCCAACCATCGAAAGAACTAGAAGCTGAAATGAAGAGATTGAGGCTTGAATTGAAGCAAACCATGGACATGTACAGCTCAGCTTGCAAAGAGGCAATCTCAGCAAAAAATAAGGCTGACGAGATTAATCAATGGAAACTAGAGGAGGCACGTAAACTTGAGGAAGCAATATTGTCAGGAGAGGCAGCTCTTGCACTGGCAGAAAAGGAGAAGGCTAGAGCCAGAGCTGCCATTGAAGAAGCTGAGGAAGCCAAGAAAATGGCTGAGAAGGAAGCAGAGAGAAGGAGACATGCAGAGATAAAGGCCAGGAAAGAAGCAGCAGAAAAGGACCGAGCATTAACTGCTTTGGCTAAAAATGATGTTCGATATAGAAAATACACAATAGAGGAGATCGAAAAAGCTACTGAAAAGTTCTCCCCTTCCTTGAAAATAGGTGAAGGTGGATATGGGCCTGTGTTTAAAGGTGAACTTGATCACACCCCAGTTGCGATCAAAATCTTAAGACCTGATGCTGCTCAGGGCAGGAAGCAGTTTCAGCAGGAGGTTGAGGTATTATGCTGCATTAGACATCCCAATATGGTCCTCCTCCTCGGTGCGTGTCCTGATTATGGGTGTTTGGTGTATGAATACATGGAGAATGGTAGCTTAGAAGATAGATTATTTCGGAAGAATAATAGCCCGCCTCTTTCATGGAGGTTAAGGTTTACAATAGCTGCTGAAATAGCAACTGCACTTCTTTTCCTTCACCAAAGCAAGCCAGAACCCCTTGTGCATCGGGACCTAAAACCAGCCAACATTCTCCTAGACCGAAATTATGTGAGTAAAATCAGTGATGTGGGCCTGGCACGATTGGTTCCGCCTTCTGTAGCTGATTCTGTCACACAATATTACATGACTGCAGCTGCCGGGACCTTTTGCTACATTGATCCTGAGTATCAACAAACAGGAAAGTTAACGACTAAATCGGATGTATATTCATTGGGGATAATGCTACTGCAAGTTGTCACAGCTAGGCCTCCCATGGGTCTTTCTCACCAGGTCAAAAGGGCAATTGAAAAAGGAAGATTTTCAGAGATGCTTGATCCTACGGTGACTGATTGGCCAGTTAAAGAGGCTCTAGCATTTGCCAAAGTGGCAGTGAGTTGCGCAGAGCTTAGCAAGAAGGACAGGCCTGATCTTGCAACAGTTGTAGTGCCAGAGCTTAACCGCTTAAGGAATTTTGGTTTGACGTCTCACCCTAGCTAG	2187	0.4568	MGSTSILRARGGNKTSSSSSSSSSSFLCNSGGGGGGSCGEQNLIMSIHQPFDGRALPLNTTVVPVDKGKTSVYAFRWALNHLDSPIIVALHVGPKHIPSHEALKVFPPDESDVANVFSALREVRTHKVVTIKEAVVDDSDVVKGISDFANHHHINSIVIGATASWNSLARKFIGFDLPTAIIKSAPDYTSVYVISKGKIVSARSALRPMSNIFAPSKQPLALQPNDVENGVRAQAAKRGGMTEGSERTSSETNKNRAREKSSGSSSMDKIDLPSRGLKPSVGPDSFSDESVSSDLTKQDLVFSFSSDGSRTSSSSQPSKELEAEMKRLRLELKQTMDMYSSACKEAISAKNKADEINQWKLEEARKLEEAILSGEAALALAEKEKARARAAIEEAEEAKKMAEKEAERRRHAEIKARKEAAEKDRALTALAKNDVRYRKYTIEEIEKATEKFSPSLKIGEGGYGPVFKGELDHTPVAIKILRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPDYGCLVYEYMENGSLEDRLFRKNNSPPLSWRLRFTIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYYMTAAAGTFCYIDPEYQQTGKLTTKSDVYSLGIMLLQVVTARPPMGLSHQVKRAIEKGRFSEMLDPTVTDWPVKEALAFAKVAVSCAELSKKDRPDLATVVVPELNRLRNFGLTSHPS	728

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g1190	728	ProSiteProfiles	Protein kinase domain profile.	452	728	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci2g1190	728	SMART	serkin_6	452	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci2g1190	728	CDD	STKc_IRAK	458	718	-	-
	Prci2g1190	728	Gene3D	HUPs	54	186	IPR014729	-
	Prci2g1190	728	PANTHER	OS02G0152300 PROTEIN	62	724	-	-
	Prci2g1190	728	Pfam	Protein tyrosine and serine/threonine kinase	457	711	IPR001245	GO:0004672\|GO:0006468
	Prci2g1190	728	MobiDBLite	consensus disorder prediction	249	265	-	-
	Prci2g1190	728	FunFam	U-box domain-containing protein 51	525	725	-	-
	Prci2g1190	728	MobiDBLite	consensus disorder prediction	1	26	-	-
	Prci2g1190	728	MobiDBLite	consensus disorder prediction	233	292	-	-
	Prci2g1190	728	Pfam	Universal stress protein family	62	174	IPR006016	-
	Prci2g1190	728	Coils	Coil	364	424	-	-
	Prci2g1190	728	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	570	582	IPR008271	GO:0004672\|GO:0006468
	Prci2g1190	728	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	60	163	-	-
	Prci2g1190	728	Gene3D	Phosphorylase Kinase; domain 1	430	524	-	-
	Prci2g1190	728	Gene3D	Transferase(Phosphotransferase) domain 1	525	722	-	-
	Prci2g1190	728	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	425	524	-	-
	Prci2g1190	728	Coils	Coil	318	338	-	-
	Prci2g1190	728	SUPERFAMILY	Protein kinase-like (PK-like)	436	711	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g1190	Prci-Chr2	8894806	8898552	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g1190	131	727	Receptor kinase-like Gene Family	AT5G12000	60.778	0.0	721

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Prci2g1190		PK_Tyr_Ser-Thr	7.2e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g1190	-		-	cave:132184791	752.666