LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci2g1189	ATGGGTTCCACTTCCATCCTCAGAGCAAGAGGTGGCAACAAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTTTGCAATAGCGGTGGAGGCGGTGGTGGCAGCTGTGGCGAGCAAAACCTAATCATGTCTATCCACCAGCCGTTTGATGGCAGAGCACTGCCTCTAAACACCACCGTGGTGCCCGTCGACAAAGGCAAGACCAGCGTGTATGCCTTCCGGTGGGCACTTAATCATCTCGATAGTCCAATCATCGTCGCTCTCCACGTTGGGCCAAAACACATTCCATCCCATGAGGCTCTCAAGGTATTTCCCCCTGATGAAAGCGATGTAGCCAATGTTTTCTCTGCATTACGAGAAGTACGTACACATAAAGTGGTGACGATTAAAGAAGCCGTAGTTGACGATAGTGATGTTGTCAAAGGAATTTCAGACTTTGCAAACCATCATCACATCAACAGTATCGTTATCGGCGCAACGGCCAGCTGGAACTCTCTGGCAAGGAAATTTATAGGTTTTGATCTGCCAACGGCCATAATCAAGTCAGCTCCAGATTATACTTCTGTGTATGTAATTTCAAAAGGGAAGATAGTCTCAGCTCGATCAGCACTGCGTCCTATGTCAAATATTTTTGCCCCGTCAAAACAACCGCTGGCACTTCAACCAAATGATGTAGAAAACGGAGTAAGGGGTTTGGCTGCAAACAGGGCACAGGCAGCTAAAAGAGGAGGGATGACAGAGGGATCAGAAAGAACGTCTTCTGAGACGAACAAGAATCGAGCAAGGGAAAAGAGTTCCGGCAGTTCGTCGATGGATAAAATCGACCTACCCAGTCGTGGGCTGAAGCCATCAGTTGGCCCTGATTCTTTTTCGGACGAAAGTGTTTCATCGGATCTAACTAAACAAGATTTGGTGTTTAGCTTTTCATCTGATGGCTCCAGGACATCATCATCCTCCCAACCATCGAAAGAACTAGAAGCTGAAATGAAGAGATTGAGGCTTGAATTGAAGCAAACCATGGACATGTACAGCTCAGCTTGCAAAGAGGCAATCTCAGCAAAAAATAAGGCTGACGAGATTAATCAATGGAAACTAGAGGAGGCACGTAAACTTGAGGAAGCAATATTGTCAGGAGAGGCAGCTCTTGCACTGGCAGAAAAGGAGAAGGCTAGAGCCAGAGCTGCCATTGAAGAAGCTGAGGAAGCCAAGAAAATGGCTGAGAAGGAAGCAGAGAGAAGGAGACATGCAGAGATAAAGGCCAGGAAAGAAGCAGCAGAAAAGGACCGAGCATTAACTGCTTTGGCTAAAAATGATGTTCGATATAGAAAATACACAATAGAGGAGATCGAAAAAGCTACTGAAAAGTTCTCCCCTTCCTTGAAAATAGGTGAAGGTGGATATGGGCCTGTGTTTAAAGGTGAACTTGATCACACCCCAGTTGCGATCAAAATCTTAAGACCTGATGCTGCTCAGGGCAGGAAGCAGTTTCAGCAGGAGGTTGAGGTATTATGCTGCATTAGACATCCCAATATGGTCCTCCTCCTCGGTGCGTGTCCTGATTATGGGTGTTTGGTGTATGAATACATGGAGAATGGTAGCTTAGAAGATAGATTATTTCGGAAGAATAATAGCCCGCCTCTTTCATGGAGGTTAAGGTTTACAATAGCTGCTGAAATAGCAACTGCACTTCTTTTCCTTCACCAAAGCAAGCCAGAACCCCTTGTGCATCGGGACCTAAAACCAGCCAACATTCTCCTAGACCGAAATTATGTGAGTAAAATCAGTGATGTGGGCCTGGCACGATTGGTTCCGCCTTCTGTAGCTGATTCTGTCACACAATATTACATGACTGCAGCTGCCGGGACCTTTTGCTACATTGATCCTGAGTATCAACAAACAGGAAAGTTAACGACTAAATCGGATGTATATTCATTGGGGATAATGCTACTGCAAGTTGTCACAGCTAGGCCTCCCATGGGTCTTTCTCACCAGGTCAAAAGGGCAATTGAAAAAGGAAGATTTTCAGAGATGCTTGATCCTACGGTGACTGATTGGCCAGTTAAAGAGGCTCTAGCATTTGCCAAAGTGGCAGTGAGTTGCGCAGAGCTTAGCAAGAAGGACAGGCCTGATCTTGCAACAGTTGTAGTGCCAGAGCTTAACCGCTTAAGGAATTTTGGTTTGACGTCTCACCCTAGCTAG	2205	0.4576	MGSTSILRARGGNKTSSSSSSSSSSFLCNSGGGGGGSCGEQNLIMSIHQPFDGRALPLNTTVVPVDKGKTSVYAFRWALNHLDSPIIVALHVGPKHIPSHEALKVFPPDESDVANVFSALREVRTHKVVTIKEAVVDDSDVVKGISDFANHHHINSIVIGATASWNSLARKFIGFDLPTAIIKSAPDYTSVYVISKGKIVSARSALRPMSNIFAPSKQPLALQPNDVENGVRGLAANRAQAAKRGGMTEGSERTSSETNKNRAREKSSGSSSMDKIDLPSRGLKPSVGPDSFSDESVSSDLTKQDLVFSFSSDGSRTSSSSQPSKELEAEMKRLRLELKQTMDMYSSACKEAISAKNKADEINQWKLEEARKLEEAILSGEAALALAEKEKARARAAIEEAEEAKKMAEKEAERRRHAEIKARKEAAEKDRALTALAKNDVRYRKYTIEEIEKATEKFSPSLKIGEGGYGPVFKGELDHTPVAIKILRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPDYGCLVYEYMENGSLEDRLFRKNNSPPLSWRLRFTIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYYMTAAAGTFCYIDPEYQQTGKLTTKSDVYSLGIMLLQVVTARPPMGLSHQVKRAIEKGRFSEMLDPTVTDWPVKEALAFAKVAVSCAELSKKDRPDLATVVVPELNRLRNFGLTSHPS	734

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci2g1189	734	Gene3D	Phosphorylase Kinase; domain 1	436	530	-	-
	Prci2g1189	734	Gene3D	HUPs	54	186	IPR014729	-
	Prci2g1189	734	MobiDBLite	consensus disorder prediction	255	271	-	-
	Prci2g1189	734	CDD	STKc_IRAK	464	724	-	-
	Prci2g1189	734	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	60	163	-	-
	Prci2g1189	734	MobiDBLite	consensus disorder prediction	1	26	-	-
	Prci2g1189	734	SMART	serkin_6	458	721	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci2g1189	734	MobiDBLite	consensus disorder prediction	238	298	-	-
	Prci2g1189	734	Pfam	Protein tyrosine and serine/threonine kinase	463	717	IPR001245	GO:0004672\|GO:0006468
	Prci2g1189	734	SUPERFAMILY	Protein kinase-like (PK-like)	442	717	IPR011009	-
	Prci2g1189	734	FunFam	U-box domain-containing protein 51	531	731	-	-
	Prci2g1189	734	Coils	Coil	370	430	-	-
	Prci2g1189	734	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	576	588	IPR008271	GO:0004672\|GO:0006468
	Prci2g1189	734	PANTHER	OS02G0152300 PROTEIN	62	730	-	-
	Prci2g1189	734	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	431	530	-	-
	Prci2g1189	734	Gene3D	Transferase(Phosphotransferase) domain 1	531	728	-	-
	Prci2g1189	734	Coils	Coil	324	344	-	-
	Prci2g1189	734	Pfam	Universal stress protein family	62	174	IPR006016	-
	Prci2g1189	734	ProSiteProfiles	Protein kinase domain profile.	458	734	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci2g1189	Prci-Chr2	8894806	8898552	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci2g1189	131	733	Receptor kinase-like Gene Family	AT5G12000	60.064	0.0	718

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Prci2g1189		PK_Tyr_Ser-Thr	7.3e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci2g1189	-		-	cave:132184791	751.125