Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1187 ATGGAGAAGATGCCATCCGCAGTTGCAGTGCCATTAAGAATAGGTAATTCAATCTGTGAAAGCTCGACCACAGCTACCCACGCGGACGTGTCCAGACTTAAGCTGATGACAGATGCGGAGTCGTTAGTTAATTCTATAAGTAAGGTTTCCACCGATACCGTTGCGGATTCTGATGAGGATCTTAATGGTGGCAATCGGGGAGATGAAATTAGTATCACAGCAGTCACACCACCTAAACAGGATACAGGAAGAGAGTCTCCTCTATCAGACATGATATCCCAAAATAAAACCACCCTGGTTGCTGGAGCCCAATTATTAACACCAGAAATTCAGGTGGAAGATGGTTTCTTATCATTGGCAGTCGATCAGATTCTTGACTGCCCTTGTTCAATTTCAGTGGCCAGTAAGAACAGTTGCTTATTGGGACAGGAGTTGGTCGGCTTTAATACGACACCCGGGGCTGCTGATTTGGGAGAAGACGTTGAGGCAGAGATTGTGAGTGAGCACCTTGCTATGGCAGTGAGCATTGATGAAGAGACTGGAATTGGATCTGGCCCTCAGCCTTCTGCAGTTGTTCTTGAGCTGCCTCCTGAAAAGAAGGTGAGCGGAGCCGTTGCTCGCAGTGTTTTTGAATTGGATTATGCTCCGCTATGGGGATATGTATCTATGTGTGGAAGAAGACCTGAGATGGAAGATGCAGTTGCAACTATACCTCGATTTTTGAAGATTCCTATTCAAATGCTGATTGGGGATCGGGTGCTTGATGGAATGAACAAGTGTTGGAGTCAGCAGACGATTCATTTTTGTGGAGTCTATGATGGTCATGGTGGCTCTCAGGTAGCAAATTATTGTCGCGACCGCATTCATTTGGCTTTGGCTGAGGAAATAGAATTTGTGAAGGATGGTCTAATTAGTGGAAGTATCAAGCCCGATTGTCAAAATCAGTGGGAGAAAGCTTTCGCCAATTGCTTTCTAAAGGTTGACGCTGAAGTTGGAGGGAACACAAATTTTGGGGTTATTGCCCCAGAGACAGTTGGTTCCACTGCCGTTGTTGCTATCATTTGTTCATCTCATATCATAGTTGCAAATTGTGGAGATTCAAGAGCAGTTTTGTGTCGAGGCAAAGAACCCATGGCATTGTCGGTGGATCATAAACCAAATCGGGATGATGAATACGCGAGAATTGAGGCAACTGGGGGCAAGGTGATCCAATGGAATGGTCACCGTGTATTTGGTGTTCTTGCCATGTCAAGGTCTATTGGTGATAGATACTTGAAGCCGTGGATTATCCCAGAGCCAGAGGTTACTTTTATTCCACGGGCAAAAGATGATGAATGCCTCATTCTGGCCAGTGATGGTCTTTGGGACGTCATGACCAATGAAGAGGCATGTGACCTAGCACAGAGACGAATACTTCTCTGGCACAAGAAAAATGGCGTTCCATTACCCCAAGAAAGGGGAGAGGGAATTGACCCTGCTGCACAAGCAGCTGCTGAATACCTTTCAAACCGTGCTCTTCAGAAAGGAAGCAAAGATAATACTACTGTGATCGTGGTGGATTTGAAAGCTCACAGAAAATTTAAAAGCAAGACATAA 1596 0.4536 MEKMPSAVAVPLRIGNSICESSTTATHADVSRLKLMTDAESLVNSISKVSTDTVADSDEDLNGGNRGDEISITAVTPPKQDTGRESPLSDMISQNKTTLVAGAQLLTPEIQVEDGFLSLAVDQILDCPCSISVASKNSCLLGQELVGFNTTPGAADLGEDVEAEIVSEHLAMAVSIDEETGIGSGPQPSAVVLELPPEKKVSGAVARSVFELDYAPLWGYVSMCGRRPEMEDAVATIPRFLKIPIQMLIGDRVLDGMNKCWSQQTIHFCGVYDGHGGSQVANYCRDRIHLALAEEIEFVKDGLISGSIKPDCQNQWEKAFANCFLKVDAEVGGNTNFGVIAPETVGSTAVVAIICSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEATGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFIPRAKDDECLILASDGLWDVMTNEEACDLAQRRILLWHKKNGVPLPQERGEGIDPAAQAAAEYLSNRALQKGSKDNTTVIVVDLKAHRKFKSKT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1187 531 ProSiteProfiles PPM-type phosphatase domain profile. 217 521 IPR001932 -
Prci2g1187 531 PANTHER PROTEIN PHOSPHATASE 172 521 IPR015655 GO:0004722|GO:0006470
Prci2g1187 531 CDD PP2Cc 219 521 IPR001932 -
Prci2g1187 531 MobiDBLite consensus disorder prediction 75 89 - -
Prci2g1187 531 FunFam Protein phosphatase 2C 16 205 531 - -
Prci2g1187 531 Gene3D - 203 531 IPR036457 -
Prci2g1187 531 Pfam Protein phosphatase 2C 251 514 IPR001932 -
Prci2g1187 531 SMART PP2C_4 207 519 IPR001932 -
Prci2g1187 531 MobiDBLite consensus disorder prediction 54 89 - -
Prci2g1187 531 SUPERFAMILY PP2C-like 213 522 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1187 Prci-Chr2 8859982 8863993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1187 1 531 PP2C-type Phosphatase Gene Family AT1G17550 48.803 3.70e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1187 K14497 - qsa:O6P43_019124 755.362