Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1180 ATGTCTGATAGTAATCCTCCAAGACCACCAGATTCACCGGAGAGCGACTTCACAAACCAGTATCCTTTTGCTGAGGTCTCTGAATTCTTCAGCTTCGAAGACGATGAGGAACCCGAGCAATCAATAATGGCTCCTGAACAAGTCCCGAATCAGCAGGTCTATCAAACCAATGAAGTAAGTGGATTTGGGGGAAGTACTGCCAACCCTTTCGAGGGGTCATCCAGTAGAGACATTGGCAGTAGTGGCGAGATCAACATCAAAGACAGAGTCGCATTCAAAACGAAGTCAGAGGTAGAGATTCTGGACGATGGGTACAAGTGGAGAAAATATGGGAAGAAGAGGGTGAAGAACAGCCCCAACCCGAGGAATTACTATAGGTGTTCGGTGGAGGGATGCCCGGTGAAAAAGAGAGTTGAGAGAGATAAGGATGATTCAAGGTATGTTATAACAACCTACGAAGGTGTACACACCCACCCAAGCTTTAGCTAG 489 0.4683 MSDSNPPRPPDSPESDFTNQYPFAEVSEFFSFEDDEEPEQSIMAPEQVPNQQVYQTNEVSGFGGSTANPFEGSSSRDIGSSGEINIKDRVAFKTKSEVEILDDGYKWRKYGKKRVKNSPNPRNYYRCSVEGCPVKKRVERDKDDSRYVITTYEGVHTHPSFS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1180 162 MobiDBLite consensus disorder prediction 58 81 - -
Prci2g1180 162 MobiDBLite consensus disorder prediction 1 20 - -
Prci2g1180 162 Gene3D WRKY domain 88 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1180 162 ProSiteProfiles WRKY domain profile. 96 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1180 162 FunFam WRKY transcription factor 57 87 161 - -
Prci2g1180 162 SUPERFAMILY WRKY DNA-binding domain 94 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci2g1180 162 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 53 159 IPR044810 GO:0003700
Prci2g1180 162 SMART WRKY_cls 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci2g1180 162 Pfam WRKY DNA -binding domain 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1180 Prci-Chr2 8831702 8832800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1180 35 161 WRKY Transcription Factor Family AT5G26170 50.000 2.06e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci2g1180 WRKY 6.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1180 - - gmx:100819462 200.675