Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1173 ATGGGAGATCCCTGGCCTGTTGTTCCCTATAATGATCCTTACGATCTCCCAATATCCTATGACATCCTCGATTTCCAGAATGATCATAATCCACTCCCTGCAGTTCCATCCAATGAGCAGAATTCTTCATCATTCGCACAACAAAGTGATGCAGATTTTCAGAGTAATGATCCGAATTCGGGTCAAGTGATTCAAGATACCGCCATGCGTGATTGTCCCCATGAAGAGGGAAAATTTGCAGCGGGTCCATCTGAACCTCGCGTTGAAAGCCATCCAAGTCAAGAGAATATGCCTTCACATAATTTCCCCAATGTGATTCCCCTTACATTTTGGCCACCAAACCCAGTCGCTTTTCATTGTAGTAGCTGCCAAGTTCTTAGAGAAATAATTCATACTAACGGGATTAAGTTCTCAAAATTAGAGATTCACGGAAGACTGGGTGTGATCTGTCATGCAATTCTTCGACAGAATATTAATGTGGGTTACTCCCGCGATGATCGGCAAATTCACATGATCGATTTTTGCGGCAGAAGTATGGAGGATGTCAAGAATTTTGTGAGGCAGTACTGCGCGGAGAAAAATGCAACGGGGTACTTCACCGTGCAAGATCCACTGTCAGCTTATTACGAAGCACTCTGCATTGGAATGGATTGGAATGAAGATATAAATGATGAATTCCTTGGCATGTGGGCTGATAATTCTGGGGGAGCATCTGATGAGGCCGAGGATATGGATAAGACTAGGACTAGTCTCTCAACACAGAGGGAGAGAGCGGGGAAGATGAAACTGAGTGATTTCAGCGACGTGTTTCATCTACCAATTGAAGAAGCAGCAAGGCAAGTAAACTTGTGTCCTACAGTTGTGAAGAAAATATGCCGTAAAGAAGGATTAGCCAGATGGCCTCACAGAAAGATAAAGAGCATAATGAGGAAAATAAACATATTGAGAGGGAGTTTAAACTCAGCAGAGGCAGCCTCGAGGGCACAAACGGAGGCAGAAATCGAGAGACTTCATCGAGAATTGATCCACCATTGTGGTGGAATCCTCCCAACTTCCTTAGATTCACTAGATTTCAATGCTTGA 1083 0.4386 MGDPWPVVPYNDPYDLPISYDILDFQNDHNPLPAVPSNEQNSSSFAQQSDADFQSNDPNSGQVIQDTAMRDCPHEEGKFAAGPSEPRVESHPSQENMPSHNFPNVIPLTFWPPNPVAFHCSSCQVLREIIHTNGIKFSKLEIHGRLGVICHAILRQNINVGYSRDDRQIHMIDFCGRSMEDVKNFVRQYCAEKNATGYFTVQDPLSAYYEALCIGMDWNEDINDEFLGMWADNSGGASDEAEDMDKTRTSLSTQRERAGKMKLSDFSDVFHLPIEEAARQVNLCPTVVKKICRKEGLARWPHRKIKSIMRKINILRGSLNSAEAASRAQTEAEIERLHRELIHHCGGILPTSLDSLDFNA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1173 360 Pfam RWP-RK domain 261 308 IPR003035 -
Prci2g1173 360 MobiDBLite consensus disorder prediction 31 66 - -
Prci2g1173 360 ProSiteProfiles RWP-RK domain profile. 248 328 IPR003035 -
Prci2g1173 360 PANTHER PROTEIN RKD4 50 340 IPR044607 GO:0003700
Prci2g1173 360 MobiDBLite consensus disorder prediction 29 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1173 Prci-Chr2 8788427 8790099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1173 242 325 NLP Transcription Factor Family AT2G43500 30.952 2.07e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Prci2g1173 RWP-RK 1.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1173 - - pcin:129302128 752.281