Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1172 ATGGAAAAAAGCAGGAGGGTAGAAGAGGCTGGAAGAGAGCTTTTGAAAGAGTACCTTCAGAATCAGAAGAAGAGCGATTTCGCATTGATGGATTTGCCTTTGAGGACAGGTGACTATGAAGAAGAAGACGGCGATGCGGCCAGCTACTCAAGTTCGGATCTTTTTGAGCTGGATCACTTGGCAGTTATGGAAAAGGGTCGGTACCGTGAGGAGCTTCCGGTGTACGAGACTACCCATGAGTTTAATGAGATTCGAGGTGGTAATAACAAGCAAGAAGGAGAGTATTTATGTGAAGGTAAAATAAAGGGAAAGGTGGAGATGTTGGGCCACGAGAAGAGAGAAAGTGAGATGAACGCTTTGTTTCAGAGACTCGGTACATTTTCCATTATTGAAGTGATCAGCACCGTCACTTGCAGATTGCGCCACCACTACTCCAATCCCAACAAGAGCTCTCAAAGTCTCATTTTCGCTTTGGCAGCAAAAGACAAAGGTATCGGGACTGGCGATCCCAAGGCAGCAATTAGCATCGGGTGGGGTGGTGAGAAAATGAACCCGAATTTCAGAGACAGCCCTGAAATTCTGCAGAGTTTAAATTCCCCGCGCCTATCTCGGCAATCATCCAAATCGGACAGCAAGCGGAAGCAACAAGTGGAGGCACCAAGCCCTGTTCCTAGCCGATGCTGCCGAGGTTTTGGTAATGTCAAGACATCGGGACCAACTTTGTCAATTTTGCAATACCAGCAGCAGCTCCAGCATTCTGAGAGATTGGAAGGAAAGGTGATAGATTTGGAGAAAGAAGTGCAGAGACAGAAAGAACTGCGAGTCTTATATAGGAAAAGGATGGAAAGAACGCAAGACTATCTAAGATATTGCCTCGAGATAGCACAGGAGAATGGCATATTGGATCTCATTACCCACTCCAAAGGCGAACTCCAACAATCCCCTTTATCAGTTCATTCTGTCAACTCCACCGCTAGTCCTCAGATTCGCTCTCCCATCCACCGCCGTCAGCACCACCCGGATCTTGCAGCCATCATCGATCATGCCAAGATTCACGGGTGGTACATTGACCCGCTCGAGATTCAGCTGGAGGAGAAGATTGGCCAGGGAACCACGGCGGAGATATATAGTGCAACTTGGCGAGGATGTGATGTAGCGGTGAAGTGCATGACTACGGACTTTTTCAGAACAAACGGCAACGGCGTCATATTTTTTGCTCAAGAGGTAGAGACTCTGTCAAGGCAGAGGCACCGGTTTGTGCTTCAGCTGATGGGGGCGTGCCTGGACCCTCCCCACCATGCCTGGTTGGTCACCGAGCGTGTGAGTACGACCCTCAAAGACTGGCTTCACGGCCCCGGCAAAAGACGCAGGGACAGGCAAATCCCACTTCCTTCCCTGAAAGACCGAGTGACGAGGGCTCTGGAGATCGCCCAGGCCATGCAGTACCTCCACGAACAGAATCCCAAGGTCATCCACCGTGACCTCAAACCCAGCAACATTTTCTTGGACGACGACCTCCACGTCAGAATTGCCGATTTCGGTCATGCCCGCTTCTTGAGCGACCACGAAATGGCCCTCACCGGCGAAACAGGAACGTACGTGTACATGGCACCGGAGTTGATCCGATGCGAGCCTTATAATGAAAAGTGTGACATATACAGTTTTGGGATCATACTGAACGAGCTTGTAACAGGAAATCACCCTTATATCGAGACAGACTACAGTCCTACCAAGATTGCGGTGGAGGTAGTGGAGGGGAAGCTGAGGCCTAGGGCTGCGGAGGACAGGGAAGGGGAAGTGGAGGAGCTGGTGCGATTGATCAGACTATGTTGGGATGGAAATCCGACCACGAGACCCTCATTCGCAACCATCACGAGTACCCTCAAAGCGTGCATAAAGAGGGCCTCTTTGGAGTAG 1917 0.5034 MEKSRRVEEAGRELLKEYLQNQKKSDFALMDLPLRTGDYEEEDGDAASYSSSDLFELDHLAVMEKGRYREELPVYETTHEFNEIRGGNNKQEGEYLCEGKIKGKVEMLGHEKRESEMNALFQRLGTFSIIEVISTVTCRLRHHYSNPNKSSQSLIFALAAKDKGIGTGDPKAAISIGWGGEKMNPNFRDSPEILQSLNSPRLSRQSSKSDSKRKQQVEAPSPVPSRCCRGFGNVKTSGPTLSILQYQQQLQHSERLEGKVIDLEKEVQRQKELRVLYRKRMERTQDYLRYCLEIAQENGILDLITHSKGELQQSPLSVHSVNSTASPQIRSPIHRRQHHPDLAAIIDHAKIHGWYIDPLEIQLEEKIGQGTTAEIYSATWRGCDVAVKCMTTDFFRTNGNGVIFFAQEVETLSRQRHRFVLQLMGACLDPPHHAWLVTERVSTTLKDWLHGPGKRRRDRQIPLPSLKDRVTRALEIAQAMQYLHEQNPKVIHRDLKPSNIFLDDDLHVRIADFGHARFLSDHEMALTGETGTYVYMAPELIRCEPYNEKCDIYSFGIILNELVTGNHPYIETDYSPTKIAVEVVEGKLRPRAAEDREGEVEELVRLIRLCWDGNPTTRPSFATITSTLKACIKRASLE 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1172 638 SMART serkin_6 361 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1172 638 ProSiteProfiles Protein kinase domain profile. 361 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1172 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Prci2g1172 638 Gene3D Transferase(Phosphotransferase) domain 1 442 635 - -
Prci2g1172 638 MobiDBLite consensus disorder prediction 178 230 - -
Prci2g1172 638 SUPERFAMILY Protein kinase-like (PK-like) 343 626 IPR011009 -
Prci2g1172 638 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 221 634 - -
Prci2g1172 638 Coils Coil 246 273 - -
Prci2g1172 638 MobiDBLite consensus disorder prediction 189 205 - -
Prci2g1172 638 Pfam Protein kinase domain 362 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1172 638 ProSitePatterns Protein kinases ATP-binding region signature. 367 388 IPR017441 GO:0005524
Prci2g1172 638 CDD STKc_MAP3K-like 367 628 - -
Prci2g1172 638 Gene3D Phosphorylase Kinase; domain 1 349 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1172 Prci-Chr2 8766693 8771630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1172 354 633 MAP Kinase Kinase Kinase AT4G35780 33.214 5.58e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Prci2g1172 Pkinase 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1172 - - pcin:129302127 1275.38