Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1170 ATGGATGCTAAGCATCGACCTTTGAAAGGCCGCGAAGTAAGCATGACGGAGAAGAAAACAGCCAACGAAGGAGAAGTGGTGGTGACTATTTCGGGTCAGCAGAACACAAATCTCACTGGAGAGGGTCCAAGCTCCAAAGCGACTGAATCTAACAATACGTCCACCGAGTACGCTAATGGATATGCGTCCTCAAAGTCGCCAGCTTTAAATCGTGCTTCCCCTGAGATAAGGTCTAATTCCAGCCCAAACAAGTCTCCAGAACTTTCTGCTCCGACCCGAAACCTTATTCGCAGAAAGTGTCTAGCAAGGACAGTGTCCATTGCTTCCGTCACTCCTAAGACGCCATTGATGGCGTCTCCGGGGATAGCTGGGGAAGATGAGGATGAAATTGTTTACAAGAAAGTTGAACTGAGTAAAGGGAAGCGTAAGGCGGTGAAGGTTAAGGATTTGATTGAGTGTATTGTGTTTGCATGCATTACTGGATTCTTGGTGGCTAGCCTGACTGTCGAAAAATTGAAAACCGTAATGATTTGGGGCCTGGGGCTTTGGAAGTGGTGTGTACTTCTGATGGTTATCTTTTGTGGCATGCGGGTTACCAAATGGTTCATGCACGTTACAATTTTCTTGATTGAAATGAACTTTTTGCTGAGGAAAAAGGTTCTCTATTTTGTTCATGGACTAAAGAAAAGTGTCCAAGTCTTCATTTGGCTGGGATTGGTTCTTCTCGCTTGGGTTCTGTTAATCCATCGCGGGGTCCAGCGATCAGAACTTGGCACACAAATTTTGAATGGTGTGACATGGACTCTTGTTTCTCTTCTCATTGGGGCATTCTTATGGGTAGCGAAGACGTCGCTGCTGAAGGTATTAGCCTCAAATTTCCATGTCAAATCTTTCTTTGATAGAATTCAAGAGTCAATCTTCCATCAGTACGTTTTGCAAAGTCTATCTGGGCCTCCATTAATAGAGGAGGCTGAGAAGGTTGGTAGATCACCGAGTATTGGTCAGGTTAGTTTCAGGAGTACAAAAGGTAAAAAAGGCACCAAGAAAGAGGTTATTAATATGGCAACGTTTCACAAGATGAAACGGGAGAAAGTTTCTGCTTGGACAATGAAGATTTTGGTTGATGCAGTGACAAATTCAAGACTGTCCACAGTCTCAAATGTTATAGATGAGAGCTTTGATGATGGAGGACTAGAACAAACCGACAAAGAAATTACAAATGAGATGGAAGCAACTGCTGCTGCATATAAGATTTTCAAGAATGTCTCTGCCCCTGGTTGCTCGTACATTGATGAGGATGACCTTTTGAGGTTCATGATTAAGGAAGAAGTAGATCTGGTCTTTCCCCTACTTGAAGGTTCAGAGACTGGACGGATAGAAAGAAAGGCTTTGACAAAATGGGTGGTTAAGGTCTATCAAGAACGCAAGGCATTGGCACATGCCTTGAGTGACACCAAGACTGCTGTAAAGCAATTGAACAAGCTTGTAACAGGGATCCTGGTTATTTTGATTGTAATTGTGTGGCTTCTACTGATGGAGATTGCAACAACAAAAGTACTAGTGTTCATTTCATCTCAGCTAGTAGTTGCGACCTTCATGTTTGGAAACACATGCAAAAATATATTTGAGGCTCTCATATTTGTGTTCGTAATGCATCCATTTGATGTTGGTGACCGATGTGTTGTAGATGGGGTCCAGCTATTGGTTGAAGAAATGAACATCTTGACAACGGTATTCTTGAAACTTGATAACGAGAAGGTGTTCTATCCAAACTCAGTTCTGGCCACAAAACCCATTAGCAATTATTACAGAAGCCCGGATATGGGTGACAATATAGAGTTTTCAATTGACTTTATGACACCATTGGAGAGGATTGGGGCACTGAAGGAAAAAATAAAAAGGTACTTGGAGGGCAATCCGCATCACTGGCATCCTAATCACAATGTAATAGTGAAGGAGATAGAAAATGTGAATAAGATCAAAATAGCTCTGTATGTTAACCACACGATGAATTTTCAAGACTTCGCGGAGAAGAACAGGAGGAGAACGGAGCTAGTGATGGAACTAAAGAAAATATTTGAGCAGCTTGATATTAGATACAATCTTCTTCCTCAGGCAGTTCAACTCAGCCATGTTGGGTCAGATACAGCCCCACTCAAGTGA 2163 0.4249 MDAKHRPLKGREVSMTEKKTANEGEVVVTISGQQNTNLTGEGPSSKATESNNTSTEYANGYASSKSPALNRASPEIRSNSSPNKSPELSAPTRNLIRRKCLARTVSIASVTPKTPLMASPGIAGEDEDEIVYKKVELSKGKRKAVKVKDLIECIVFACITGFLVASLTVEKLKTVMIWGLGLWKWCVLLMVIFCGMRVTKWFMHVTIFLIEMNFLLRKKVLYFVHGLKKSVQVFIWLGLVLLAWVLLIHRGVQRSELGTQILNGVTWTLVSLLIGAFLWVAKTSLLKVLASNFHVKSFFDRIQESIFHQYVLQSLSGPPLIEEAEKVGRSPSIGQVSFRSTKGKKGTKKEVINMATFHKMKREKVSAWTMKILVDAVTNSRLSTVSNVIDESFDDGGLEQTDKEITNEMEATAAAYKIFKNVSAPGCSYIDEDDLLRFMIKEEVDLVFPLLEGSETGRIERKALTKWVVKVYQERKALAHALSDTKTAVKQLNKLVTGILVILIVIVWLLLMEIATTKVLVFISSQLVVATFMFGNTCKNIFEALIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLDNEKVFYPNSVLATKPISNYYRSPDMGDNIEFSIDFMTPLERIGALKEKIKRYLEGNPHHWHPNHNVIVKEIENVNKIKIALYVNHTMNFQDFAEKNRRRTELVMELKKIFEQLDIRYNLLPQAVQLSHVGSDTAPLK 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1170 720 MobiDBLite consensus disorder prediction 1 90 - -
Prci2g1170 720 FunFam Predicted mechanosensitive ion channel 553 602 - -
Prci2g1170 720 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 12 711 IPR016688 -
Prci2g1170 720 PIRSF Memb_At2g17000 3 718 IPR016688 -
Prci2g1170 720 Gene3D - 553 602 IPR023408 -
Prci2g1170 720 SUPERFAMILY Sm-like ribonucleoproteins 543 602 IPR010920 -
Prci2g1170 720 MobiDBLite consensus disorder prediction 26 90 - -
Prci2g1170 720 Pfam Mechanosensitive ion channel 494 699 IPR006685 GO:0016020|GO:0055085
Prci2g1170 720 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1170 Prci-Chr2 8752504 8758124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1170 15 710 Mechanosensitive Ion Channel Family AT5G12080 55.705 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1170 K22048 - qsa:O6P43_019135 1000.35