Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1167 ATGGGCTGGGGTCACCTGGGAAGAACTGAGCATTCCAACTCGGGTGAGCCGAGTACCAGTGCCGACGCTGCTCCCTCCAACACCGAACCATCTATACCTCGGCGATTCCCCAGGGCGGCTCAGCCTGAGATCATGAGAGCGGCTGAGAAGGATGATCAGTATGCCTCTTTCGTCTATGAAGCTTGTCGCGATGCCTTCCGTCACCTCTTTGGTACTAGAGTTGCGGTTACCTATCAAAGTGAGACAAAATTATTGGGACAGATGCTTTACTATGTGATGACAACAGGTTCAGGACAACAGACGCTCGGAGAGGAATACTGTGACATCACTCAGGTTGGAGGACCTTATGGACTTCCTCCTACTCCTGCAAGGCGTGCCCTTTTTATTGTATACCAGACAGCTGTTCCATATATTGCCGAACGAATTAGTTCTAGAATTGCATCCCGAGGAATTGTCCTTGCTGATTCACAATCTGTGGAGACCTATAGCGAAAATGCTACCATTAGGAGTAGTGAATTTCAAACTTCTGATGTGAGTGAACTTCCCTCTTCCACGTCAGGGCAATCTCCTGCAACTCTGACAAGGTTGAAGGAGAAGCTGAGAGGATTTTGGTTGCATGTAGTTCGGAGATGGCCTACGATGCTTCCTATGGTTCGTGAGTTGTTGCAGCTGGTTCTGCGGGCTAATCTTATGTTCTTCTATTTTGAAGGTCTCTATTATCATATATCAAAACGTGCTGCAGGAATTCGATATGTCTTCATTGGAAAATCATCAAATCAAAGGCCCAGATACCAAATTCTGGGTGTATTTCTATTGATTCAGCTTTGTATAATTGCTGCTGAAGGGCTTCGTCGAAGCCATTTATCTTCAATTGCAAGTTCAGTTCATCAGACATCCTTTGGGACGCCCCAGAGATTTGCAGGACGAGGTTTGCCTGTTTTAAATGAAGAGGGTCTTCCAGCATCATCAGATACAGACAAAGGAAATTGGTTATCCGACACTACAAATTCTGAGTCCCAAGCAATTAGTGGAGTGAGCAAATGCACGCTCTGCCTGAGTAATCGGCAACACCCAACAGCCACTTCCTGTGGCCATGTATTTTGCTGGAACTGTATAACGGAATGGTGCAACGAAAAGCCAGAATGCCCTCTTTGCCGCACCCCCTTAACGCACTCAAGTCTAGTGTGCTTGTATCATTCAGACTTCTAG 1209 0.4657 MGWGHLGRTEHSNSGEPSTSADAAPSNTEPSIPRRFPRAAQPEIMRAAEKDDQYASFVYEACRDAFRHLFGTRVAVTYQSETKLLGQMLYYVMTTGSGQQTLGEEYCDITQVGGPYGLPPTPARRALFIVYQTAVPYIAERISSRIASRGIVLADSQSVETYSENATIRSSEFQTSDVSELPSSTSGQSPATLTRLKEKLRGFWLHVVRRWPTMLPMVRELLQLVLRANLMFFYFEGLYYHISKRAAGIRYVFIGKSSNQRPRYQILGVFLLIQLCIIAAEGLRRSHLSSIASSVHQTSFGTPQRFAGRGLPVLNEEGLPASSDTDKGNWLSDTTNSESQAISGVSKCTLCLSNRQHPTATSCGHVFCWNCITEWCNEKPECPLCRTPLTHSSLVCLYHSDF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1167 402 MobiDBLite consensus disorder prediction 1 37 - -
Prci2g1167 402 Pfam Pex2 / Pex12 amino terminal region 51 285 IPR006845 -
Prci2g1167 402 PANTHER PEROXISOME ASSEMBLY PROTEIN 10 37 400 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Prci2g1167 402 MobiDBLite consensus disorder prediction 11 27 - -
Prci2g1167 402 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 324 399 IPR013083 -
Prci2g1167 402 SMART ring_2 348 385 IPR001841 -
Prci2g1167 402 Pfam Ring finger domain 347 386 IPR001841 -
Prci2g1167 402 CDD RING-HC_PEX10 346 397 - -
Prci2g1167 402 ProSiteProfiles Zinc finger RING-type profile. 348 386 IPR001841 -
Prci2g1167 402 SUPERFAMILY RING/U-box 347 391 - -
Prci2g1167 402 ProSitePatterns Zinc finger RING-type signature. 363 372 IPR017907 -
Prci2g1167 402 FunFam Peroxisome biogenesis factor 10 323 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1167 Prci-Chr2 8724328 8728478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1167 343 398 C3H Transcription Factor Family AT4G27470 37.879 1.10e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1167 K13346 - qsa:O6P43_015847 639.417