Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1165 ATGAGGAGGAGCACTACTCCAAGTTGCTCCAGGGAAGGAGAAGGACTGAACAAAGGAGCGTGGACAGCTCAAGAGGACAAGTTGCTCACTTGTTACATTATGGTCCACGGCGAAGGCAAATGGACCCACGTCCCTATAAGAGCTGGCTTAAATAGGAGTGGCAAAAGCTGTAGGCTTCGATGGCTGAACTATCTCAGGCCTGATATTAAGAGAGGTAACATCACCCAAGATGAAGAGGACCTCATCATTAGACTTCATAAACTTCTTGGTAACAGATGGTCTCTTATAGCTGGAAGGCTACCTGGAAGAACAGACAATGAAATCAAGAACTACTGGAACACCACTTTAGCTAAGAAGCTAAGAACACAGTCAGGCCCAACGTCTGAACAACATCCATCCAGCAAATCAGGCGAGTCTGATGAAATCAACAGACCACTAGTAATCCAAAAGAAGGCCGGAAGATGCAAAAACGTGGTTATCCAACATCCTCCTTATTCTGAGGAAACGTCAACCATTAACTCTCAAGCTTCCAACCAGTTGGTCTTTGAGGAAGCTCACCTCACTCGCCAGTTCACAGACCAGTTTCCGCAGGCTGTTGGTGAATGTCAGAATTCAGATGTCAACTTGTCGGGTCCTGAACGGAATGATGAGTTTCAAGATGAACTGAATGCAGTAGATTTTTTCAGGGAGTTTGGCCTTGACAATAGCATGCCCGTGGCCATGGATGCTCAAGCAGACGAGTTCTCGCTTATCGACGAACTTGTCGATTGCCGGATAACTGATGGGTTCAGGAACGTTGTCAGTGCGGATCTAGATTTGACAACATTCATGATGGATTCTGGGGATTGGCCCTGGATTCGTTTTTAG 867 0.4637 MRRSTTPSCSREGEGLNKGAWTAQEDKLLTCYIMVHGEGKWTHVPIRAGLNRSGKSCRLRWLNYLRPDIKRGNITQDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLAKKLRTQSGPTSEQHPSSKSGESDEINRPLVIQKKAGRCKNVVIQHPPYSEETSTINSQASNQLVFEEAHLTRQFTDQFPQAVGECQNSDVNLSGPERNDEFQDELNAVDFFREFGLDNSMPVAMDAQADEFSLIDELVDCRITDGFRNVVSADLDLTTFMMDSGDWPWIRF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1165 288 Gene3D - 18 70 - -
Prci2g1165 288 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 192 - -
Prci2g1165 288 CDD SANT 20 65 IPR001005 -
Prci2g1165 288 MobiDBLite consensus disorder prediction 119 143 - -
Prci2g1165 288 Gene3D - 73 144 - -
Prci2g1165 288 SMART sant 17 67 IPR001005 -
Prci2g1165 288 SMART sant 70 118 IPR001005 -
Prci2g1165 288 Pfam Myb-like DNA-binding domain 71 115 IPR001005 -
Prci2g1165 288 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Prci2g1165 288 FunFam Myb transcription factor 18 70 - -
Prci2g1165 288 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Prci2g1165 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Prci2g1165 288 CDD SANT 75 116 IPR001005 -
Prci2g1165 288 MobiDBLite consensus disorder prediction 119 133 - -
Prci2g1165 288 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Prci2g1165 288 FunFam Transcription factor TT2 74 144 - -
Prci2g1165 288 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Prci2g1165 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1165 Prci-Chr2 8706189 8707291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1165 1 124 MYB Transcription Factor Family AT3G13540 64.516 3.91e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci2g1165 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1165 K09422 - qsu:112011853 224.172