Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1154 ATGGCGACTCATCTGCTGAGACATTCTCTCTCTCCTCAACCTGAGATCTTCTTCAGTTATAGAAGAAACAGCGATGTCCTCGGCGTTGACTTCATTTCTCGACTGCCGAGGGCGCGACATCGCAACTTCACACGTCGGAGCATTCTGCGGTCACATACGGATCCAAACTTTGCCGTATGCAGCTCACTTGAAACTAGAATTGACTCGGCCGCAACCACCCTGCAAGCGCAGGAGAATAGTAAAGATTCGCCCATTTTACTAGATGTTACTGGAATGATGTGTGGAGCTTGCGTCTCCCGAGTTAAAAACATTCTGTCTGCCGACGAGCGAGTTGACTCGGTCGTCGTCAACATGTTGACCGAGACCGCCGCCGTTAAGTTGAAAAAACTCGACGTTGCCCCAGCTTCAGTTCTGGAGACCGATTATCCGGGAATTGTAGCCGAGGCCCTTGCTGGGAGACTGACTGAATGTGGTTTTCCCACCAAACTGAGGGTTTCGGGTACGGGAATGGCGGAAAATGTGAGGAAGTGGAAGGATTTGGCGAAGAAGAAGGAGGAACTGCTTGCGAAGAGTCGGAACCGTGTTGCCTTTGCTTGGACTTTGGTGGCGTTGTGCTGTGGATCGCATGCTTCGCATATTTTACATTCTTTAGGAATCCACATTGCTCATGGACCTGTATGGGCAGCTCTTCATAATTCATATGCGAAAGGTATAGCTTCGGCAGCTCTGTTGGGACCAGGTCGAGAATTACTGGTCGATGGCCTAAAGGCATTTAAAAAGGGATCACCAAATATGAACTCTCTTGTGGGATTCGGTTCTATTGCTGCCTTCATCATCAGTTCGATCTCACTACTTAATCCTGGGCTGGCTTGGGATGCATCATTCTTTGATGAGCCGGTCATGCTTCTTGGTTTTGTGCTTCTAGGGCGTTCTTTGGAAGAAAGGGCGAGAATTCAGGCATCTAGTGATATGAATGAACTTCTTTCATTGATTTCGACTCAATCAAGACTTGTGATTACTTCCTCAGAAGGGGCTCCATCTCCGGCTAGTGTGCTTTGCTCTGATGCGATCTGTGTTGAAGTCCCAACTGACAATGTTCGAGTAGGTGATTCAGTGTTGGTGTTACCTGGAGAAACTATTCCCATAGATGGAAGGGTTATTTCTGGAAGAAGTGTTGTGGATGAGTCAATGCTAACAGGAGAGTCACTTCCTGTGTATAAAGAAGAAGGCTTCACAGTTTCTGCGGGAACTATAAACTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGCTCCAACACAATGATATCCAAAATTGTCCGCATGGTTGAGGATGCTCAATCGCGTGAAGCACCCATACAAAGGCTTGCAGATTCAATAGCTGGCCCATTTGTATACAGTGTTATGACTCTGTCAGCAGCAACGTTTGCATTTTGGTTTGTAATTGGATCACATATTTTTCCAGATGTTTTACTTAATGATATTGCGGGTCCAGAAGGAGATCCTTTGCTTTTGAGCTTGAAACTTTCTGTAGATGTCTTGGTTGTGTCTTGCCCTTGTGCACTGGGCCTTGCCACACCCACAGCAATCCTAGTCGGCACCTCACTTGGTGCAAGAAAAGGACTTCTCATTAGAGGTGGAGATGTGTTGGAACGCTTAGCTAGCATAAACTTCATTGCTCTAGACAAGACAGGAACCATCACCAGAGGAAAACCAGTTGTCTCTGCTGTGGGCTCTTGTAATTATAAGGAATCAGAAATTCTTCAGCTCGCTGCTGCAGTGGAGAAAACAGCATCTCATCCAATAGCAAAGGCTATTACCAATAAAGCTGAATCATTAGAATTGGTCCTTCCAGTCACAAAAGGGCAGTTAGTTCAGCCGGGTTTTGGAACCTTGGCAGAAATAGATGGACGGTTGGTGGCAGTCGGTTCCTTAGAATGGGTACATGAGCGATTCCAGACAAGAATGAATTTATCTGATTTGATGAATCTGGAGGATATTTTGATGAATAAATTATCAAACAATATACCTTCGAACTATTCAAAAACCGTTGTCCACGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATATCTGACATTTTGCGTGATGATGCTAAATCTACAGTAATGAGACTCCAGCAGAAGGGTATTAAAACAGTCCTCTTGTCAGGGGACAGGGAAGAGGCAGTTGCAACAGTTGCAGAAACAGTTGGGATAGAAAGTAGTTTAGTCAAAGCATCGCTGTCTCCACAGCAGAAATCTACATTTATTTCGTCTCTCAAAGCTGCTGGACATTGTGTTGCAATGGTAGGTGATGGGATAAATGATGCGCCCTCTTTGGCCGTAGCTGATGTTGGAATTGCTCTGCAGAATGAAGCTCAAGAAAATGCTGCGTCAGATGCAGCATCAATTATATTAATTGGGAACAGAATTTCACAAGTTGTAGATGCCCTAGACCTGGCACAGGCAACCATGGCGAAAGTGTACCAGAATTTGTCTTGGGCAGTCGCTTATAATGTTGTCGCCATGCCCATTGCCGCTGGTGTGTTACTTCCCCGATTTGATTTTGCTATGACGCCTTCACTTTCAGGGGGATTGATGGCTTTGAGCTCCATTTTCGTGGTTGGCAACTCATTGCTTCTACAGCTTCATGAGTTCAAAAACAAGCAACAAGGGCCAGCTCCAATCACCTTTTGA 2709 0.4566 MATHLLRHSLSPQPEIFFSYRRNSDVLGVDFISRLPRARHRNFTRRSILRSHTDPNFAVCSSLETRIDSAATTLQAQENSKDSPILLDVTGMMCGACVSRVKNILSADERVDSVVVNMLTETAAVKLKKLDVAPASVLETDYPGIVAEALAGRLTECGFPTKLRVSGTGMAENVRKWKDLAKKKEELLAKSRNRVAFAWTLVALCCGSHASHILHSLGIHIAHGPVWAALHNSYAKGXIASAALLGPGRELLVDGLKAFKKGSPNMNSLVGFGSIAAFIISSISLLNPGLAWDASFFDEPVMLLGFVLLGRSLEERARIQASSDMNELLSLISTQSRLVITSSEGAPSPASVLCSDAICVEVPTDNVRVGDSVLVLPGETIPIDGRVISGRSVVDESMLTGESLPVYKEEGFTVSAGTINWDGPLRIEASSTGSNTMISKIVRMVEDAQSREAPIQRLADSIAGPFVYSVMTLSAATFAFWFVIGSHIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINFIALDKTGTITRGKPVVSAVGSCNYKESEILQLAAAVEKTASHPIAKAITNKAESLELVLPVTKGQLVQPGFGTLAEIDGRLVAVGSLEWVHERFQTRMNLSDLMNLEDILMNKLSNNIPSNYSKTVVHVGREGEGIIGAIAISDILRDDAKSTVMRLQQKGIKTVLLSGDREEAVATVAETVGIESSLVKASLSPQQKSTFISSLKAAGHCVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILIGNRISQVVDALDLAQATMAKVYQNLSWAVAYNVVAMPIAAGVLLPRFDFAMTPSLSGGLMALSSIFVVGNSLLLQLHEFKNKQQGPAPITF 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1154 903 Gene3D - 76 165 - -
Prci2g1154 903 SFLD p-type atpase 545 828 IPR044492 -
Prci2g1154 903 SUPERFAMILY Calcium ATPase, transduction domain A 355 445 IPR008250 -
Prci2g1154 903 ProSiteProfiles Heavy-metal-associated domain profile. 83 162 IPR006121 GO:0046872
Prci2g1154 903 Gene3D - 553 826 IPR023214 -
Prci2g1154 903 FunFam Copper-transporting ATPase 1, putative 318 449 - -
Prci2g1154 903 Pfam Heavy-metal-associated domain 87 132 IPR006121 GO:0046872
Prci2g1154 903 ProSitePatterns E1-E2 ATPases phosphorylation site. 564 570 IPR018303 -
Prci2g1154 903 PRINTS P-type cation-transporting ATPase superfamily signature 720 730 - -
Prci2g1154 903 PRINTS P-type cation-transporting ATPase superfamily signature 775 794 - -
Prci2g1154 903 PRINTS P-type cation-transporting ATPase superfamily signature 562 576 - -
Prci2g1154 903 PRINTS P-type cation-transporting ATPase superfamily signature 395 409 - -
Prci2g1154 903 PRINTS P-type cation-transporting ATPase superfamily signature 698 709 - -
Prci2g1154 903 CDD HMA 87 160 IPR006121 GO:0046872
Prci2g1154 903 Coils Coil 174 194 - -
Prci2g1154 903 Gene3D - 318 449 - -
Prci2g1154 903 FunFam Copper-transporting ATPase PAA2, chloroplastic 573 706 - -
Prci2g1154 903 Gene3D - 573 706 IPR023299 GO:0000166
Prci2g1154 903 SUPERFAMILY HAD-like 561 883 IPR036412 -
Prci2g1154 903 Pfam haloacid dehalogenase-like hydrolase 558 789 - -
Prci2g1154 903 NCBIfam heavy metal translocating P-type ATPase 266 886 IPR027256 GO:0006812|GO:0016020|GO:0019829
Prci2g1154 903 NCBIfam HAD-IC family P-type ATPase 347 863 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci2g1154 903 PANTHER ATP7, ISOFORM B 64 888 - -
Prci2g1154 903 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 564 656 IPR023299 GO:0000166
Prci2g1154 903 SUPERFAMILY Calcium ATPase, transmembrane domain M 295 556 IPR023298 -
Prci2g1154 903 SFLD Haloacid Dehalogenase 545 828 - -
Prci2g1154 903 SUPERFAMILY HMA, heavy metal-associated domain 85 137 IPR036163 GO:0046872
Prci2g1154 903 Pfam E1-E2 ATPase 347 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1154 Prci-Chr2 8552652 8562030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1154 248 894 Primary Pumps ATPases AT1G63440 35.703 6.49e-116 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1154 K17686 - gmx:100127402 1336.63