Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1153 ATGGCATTTCGGTTTGGACTTGTTCTTCTGGCTTTTGTCATTTGTTTGAACTTCAACTCGGTGGATTCAGACGATGGGGCAACATTACTAGAGATAAAGAAGTCGTTCAGGGATGTGGATAATGTTCTCTATGACTGGACAGACTCTCCATCTTCCGATTATTGTGTCTGGAGAGGGGTTACATGCGATAATGTCACCTTCAATATCGTTGCACTAAACCTTTCAAGTTTGAATCTGGACGGCGAAATCTCACCTGCAATCGGCGGCCTTAAGAGCTTGGTCTCTATCGACCTTAGAGGGAATCGATTTTCGGGCCAGATACCAGATGAGATTGGTGACTGTTCATCTTTGAAGAGCTTGGACTTATCATTTAATGAGATACGGGGAGACATCCCATTTTCAATTTCAAAGTTGAAACAACTGGAAAATCTAATTTTGAAAAATAACCAGTTAATAGGACCAATTCCTTCAACATTGTCTCAGATTCCCAACTTGAAGATTCTTGACCTTGCTCAAAACAATCTTAGCGGTGAAATACCAAGGCTTATGTACTGGAACGAGGTCTTGCAGTATCTGGGCTTGCGAGGAAACAATTTAGGGGGCTCACTCTCTCCTGACATGTGCCAATTAACTGGACTATGGTATTTTGATGTAAGGAACAACAGCTTGACTGGGAGCATTCCTGAAAGTATAGGCAATTGTACTGCCTTCCAGGTCTTGGATCTATCCTACAACCGGCTGACCGGAAAGATACCATTCAATATTGGGTTCCTTCAAGTAGCAACATTGTCATTGCAAGGCAATAAACTCTCTGGACCTATTCCATCAGTGATTGGGCTCATGCAAGCACTTGCTGTATTAGATTTGAGTTGTAACATGCTAAGTGCCATCCCTCCTATCTTGGGAAATTTGACATACACTGAAAAATTGTATTTGCACGGGAATAAATTGACTGGCACTATTCCCCCTGAGCTGGGAAATATGACGAAGCTTCACTACTTGGAACTGAATGATAACCATTTGAGTGGACATATCCCACCTGAGCTTGGAAGACTTGCTGATTTGTTTGATTTAAATGTTGCTAACAACAATCTTGAGGGGCCAATTCCTGAAAATATTAGCTCATGCAAAAATCTCAACAGCCTCAATGTGCATGGAAACAAGTTAAATGGAACAATCCCCTCAACTTTTCAGAGCTTGGAGAGTATGACGTATCTGAATCTTTCCTCCAACAAGCTTCGAGGCCCCATTCCAATTGAGCTGTCAAGGATTGGTAATTTGGATACCTTGGATATTTCTAATAATAATATAAGCGGGTCTGTTCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGCAGAAATCATCTAACTGGGTTTATTCCAGCTGAGTTTGGTAATTTAAGGAGTATTATGGATATAGATCTTTCAAATAACCAACTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAATATGATATCCCTGAGACTGGAAAACAACAATCTATCCGGGGATATGACTTCTCTTATAAATTGCCTTAGCCTTTCTTTACTTAATGTGTCCTATAACAATCTAGTTGGTGTGATTCCCACAAGCAATAATTTCTCCAGGTTTTCTCCAGACAGTTTCATAGGAAACCCTGGTCTTTGTGGCTATTGGATGGCTTCACCTTGTCACATGTCTCATCCAACTGAGCGAGTTACATTATCTAAGGCAGCTATCCTAGGAATTGCTCTTGGTGCCCTTGTGATTCTTCTTATGATATTACTAGCAGCTTGTCGGCCATACAATCCATCCCCTTTCCTTGATGGATCACTTGACAAACCAGTTAATTATTCACCGCCAAAGCTAGTGATTCTTCATATGAACATGGCCCTTCACGTTTATGAGGATATCATGAGGATGACTGAAAATCTGAGTGAGAAGTACATAATTGGATATGGTGCATCAAGCACAGTATATAAGTGCGTCCTCAAAAATTGCAAGCCAGTAGCTATCAAGAGGCTCTACTCTCATTATCCCCAAAGCTTTAAAGAATTTGAGACAGAACTTGAGACGGTTGGCAGCATCAAGCACCGAAACCTGGTTAGTCTCCAAGGCTACTCCTTGTCGCCCTATGGGAACCTTCTCTTCTATGACTACATGGACAATGGCAGTCTATGGGATCTTCTCCATGGAGCTTCTAAAAAGAAAAAGCTCGACTGGGGTCTCCGTTTAAAAATAGCACTAGGGGCAGCACAAGGGCTTGCTTATCTACACCATGATTGCTGCCCCCGGATCATCCACCGGGATGTGAAATCATCGAATATTCTGTTGGACAAGGACTTTGAGGCCCATCTCACTGACTTTGGCATTGCTAAAAGTCTATGCCCCTCCAAATCCCACACTTCAACTTACATAATGGGCACAATTGGTTATATAGACCCTGAATATGCTCGAACCTCCCGTCTCACTGAGAAGTCCGATGTCTATAGTTTTGGCATTGTTTTACTTGAGTTGCTCACTGGCAGGAAAGCTGTGGACAATGAATCCAATCTCCATCACCTGATCTTGTCAAAGACAGCAAACAATGCTGTGATGGAGACGGTTGATCCTGATATTACTGCCTCATGCAAGGACCTGGGAGCAGTAAAGAAGGTATTTCAGCTAGCCCTTTTGTGCACAAAGAGACAGCCAGTTGATAGGCCGACAATGCATGAGGTGACGCGCGTGCTGGGAAGCCTTGTACCACCCACCTCCCCACCGAAACAAGCAGCCCCACCTCCTGCAGCTTCTGCTCTGCTTCCATCTGCAAAGGTGCCATCTTGCTATATGGATGAGTATGCAAATCTTAGAGCTCCGCACTTGGTGAACTGCCCCTCCATGAGCACCTCTGATGCCCAGCTCTTCCTCAAATTTGGGGAGGTCATTTCTCAGAACAGCGAATGA 2949 0.4334 MAFRFGLVLLAFVICLNFNSVDSDDGATLLEIKKSFRDVDNVLYDWTDSPSSDYCVWRGVTCDNVTFNIVALNLSSLNLDGEISPAIGGLKSLVSIDLRGNRFSGQIPDEIGDCSSLKSLDLSFNEIRGDIPFSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLMYWNEVLQYLGLRGNNLGGSLSPDMCQLTGLWYFDVRNNSLTGSIPESIGNCTAFQVLDLSYNRLTGKIPFNIGFLQVATLSLQGNKLSGPIPSVIGLMQALAVLDLSCNMLSGXIPPILGNLTYTEKLYLHGNKLTGTIPPELGNMTKLHYLELNDNHLSGHIPPELGRLADLFDLNVANNNLEGPIPENISSCKNLNSLNVHGNKLNGTIPSTFQSLESMTYLNLSSNKLRGPIPIELSRIGNLDTLDISNNNISGSVPSSLGDLEHLLKLNLSRNHLTGFIPAEFGNLRSIMDIDLSNNQLSGLIPEELSQLQNMISLRLENNNLSGDMTSLINCLSLSLLNVSYNNLVGVIPTSNNFSRFSPDSFIGNPGLCGYWMASPCHMSHPTERVTLSKAAILGIALGALVILLMILLAACRPYNPSPFLDGSLDKPVNYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQSFKEFETELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMDNGSLWDLLHGASKKKKLDWGLRLKIALGAAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMETVDPDITASCKDLGAVKKVFQLALLCTKRQPVDRPTMHEVTRVLGSLVPPTSPPKQAAPPPAASALLPSAKVPSCYMDEYANLRAPHLVNCPSMSTSDAQLFLKFGEVISQNSE 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1153 983 Gene3D Ribonuclease Inhibitor 346 441 IPR032675 -
Prci2g1153 983 Gene3D Ribonuclease Inhibitor 442 567 IPR032675 -
Prci2g1153 983 Gene3D Ribonuclease Inhibitor 22 184 IPR032675 -
Prci2g1153 983 Gene3D Ribonuclease Inhibitor 185 258 IPR032675 -
Prci2g1153 983 Gene3D Phosphorylase Kinase; domain 1 620 722 - -
Prci2g1153 983 SUPERFAMILY L domain-like 259 546 - -
Prci2g1153 983 Gene3D Ribonuclease Inhibitor 259 345 IPR032675 -
Prci2g1153 983 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Prci2g1153 983 Gene3D Transferase(Phosphotransferase) domain 1 723 921 - -
Prci2g1153 983 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 297 569 - -
Prci2g1153 983 ProSiteProfiles Protein kinase domain profile. 647 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1153 983 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 187 296 - -
Prci2g1153 983 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 723 924 - -
Prci2g1153 983 SUPERFAMILY Protein kinase-like (PK-like) 624 913 IPR011009 -
Prci2g1153 983 PANTHER LEUCINE RICH REPEAT KINASE 2 376 917 - -
Prci2g1153 983 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 618 722 - -
Prci2g1153 983 SUPERFAMILY L domain-like 23 306 - -
Prci2g1153 983 Pfam Protein kinase domain 650 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1153 983 ProSiteProfiles Leucine-rich repeat profile. 116 139 IPR001611 GO:0005515
Prci2g1153 983 SMART serkin_6 647 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci2g1153 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Prci2g1153 983 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Prci2g1153 983 Pfam Leucine rich repeat 427 486 IPR001611 GO:0005515
Prci2g1153 983 Pfam Leucine rich repeat 359 414 IPR001611 GO:0005515
Prci2g1153 983 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 22 186 - -
Prci2g1153 983 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
Prci2g1153 983 SMART LRR_typ_2 90 114 IPR003591 -
Prci2g1153 983 SMART LRR_typ_2 210 234 IPR003591 -
Prci2g1153 983 SMART LRR_typ_2 425 448 IPR003591 -
Prci2g1153 983 SMART LRR_typ_2 162 186 IPR003591 -
Prci2g1153 983 SMART LRR_typ_2 449 472 IPR003591 -
Prci2g1153 983 SMART LRR_typ_2 281 305 IPR003591 -
Prci2g1153 983 SMART LRR_typ_2 329 353 IPR003591 -
Prci2g1153 983 SMART LRR_typ_2 473 496 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1153 Prci-Chr2 8539020 8547648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1153 92 982 Receptor kinase-like Gene Family AT5G07180 65.919 0.0 1153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Prci2g1153 Pkinase 8.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1153 K20718 - gmx:100782307 1686.39