Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1144 ATGGCTTCCACAGTGCCTAATGATTCCGACCACACTCTGCTGAGAACTACTAACGACTCTTGCTCCGGCAAGTACAAAGGCGTTCGAAAGCGAAAATGGGGCAAGTGGGTCTCTGAAATCCGGCTTCCCAACAGCCGCGAGCGCATTTGGTTGGGTTCCTATGATTCGCCGGAGAAGGCTGCTCGAGCCTTCGATGCAGCGCTGTACTGCCTGCGCGGTCGCCACGCCAATTTCAATTTCCCGGACACGCCCTTGGAGCTGGAGATCAGTGTTTCTGGTGATCACCAACAGACTCGTTCCGCTCAGGAAATCCAGGAGCTTGCTGCTAGGTTTGCCAACGAGCACCAGCAGGACCCGCCGCTGGTTCATCAGCAATCATCAGATGGGGTTGCTGAGAGTGGCGATCCTGTGGAGGTAGACACCGGGGTCGGGGACTTGAGGGGCATTAACGATTGGTCGTTCCTGAAGTCACTGGATGAGACTGGCTCCGCCAACTACACTAATTATAATTGTAGTGGTTTCTACCCTGGCTTCGATAAGATGCACCCTGGCGTGCGTGCGGGTCACTGA 570 0.5526 MASTVPNDSDHTLLRTTNDSCSGKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGRHANFNFPDTPLELEISVSGDHQQTRSAQEIQELAARFANEHQQDPPLVHQQSSDGVAESGDPVEVDTGVGDLRGINDWSFLKSLDETGSANYTNYNCSGFYPGFDKMHPGVRAGH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1144 189 MobiDBLite consensus disorder prediction 117 139 - -
Prci2g1144 189 FunFam Ethylene-responsive transcription factor 2 24 82 - -
Prci2g1144 189 CDD AP2 24 83 IPR001471 GO:0003700|GO:0006355
Prci2g1144 189 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Prci2g1144 189 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Prci2g1144 189 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Prci2g1144 189 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 127 - -
Prci2g1144 189 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Prci2g1144 189 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Prci2g1144 189 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Prci2g1144 189 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1144 Prci-Chr2 8460419 8461366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1144 14 179 AP2-EREBP Transcription Factor Family AT1G19210 51.205 5.13e-46 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci2g1144 AP2 1.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1144 - - pcin:129301731 398.282