Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci2g1144 | ATGGCTTCCACAGTGCCTAATGATTCCGACCACACTCTGCTGAGAACTACTAACGACTCTTGCTCCGGCAAGTACAAAGGCGTTCGAAAGCGAAAATGGGGCAAGTGGGTCTCTGAAATCCGGCTTCCCAACAGCCGCGAGCGCATTTGGTTGGGTTCCTATGATTCGCCGGAGAAGGCTGCTCGAGCCTTCGATGCAGCGCTGTACTGCCTGCGCGGTCGCCACGCCAATTTCAATTTCCCGGACACGCCCTTGGAGCTGGAGATCAGTGTTTCTGGTGATCACCAACAGACTCGTTCCGCTCAGGAAATCCAGGAGCTTGCTGCTAGGTTTGCCAACGAGCACCAGCAGGACCCGCCGCTGGTTCATCAGCAATCATCAGATGGGGTTGCTGAGAGTGGCGATCCTGTGGAGGTAGACACCGGGGTCGGGGACTTGAGGGGCATTAACGATTGGTCGTTCCTGAAGTCACTGGATGAGACTGGCTCCGCCAACTACACTAATTATAATTGTAGTGGTTTCTACCCTGGCTTCGATAAGATGCACCCTGGCGTGCGTGCGGGTCACTGA | 570 | 0.5526 | MASTVPNDSDHTLLRTTNDSCSGKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALYCLRGRHANFNFPDTPLELEISVSGDHQQTRSAQEIQELAARFANEHQQDPPLVHQQSSDGVAESGDPVEVDTGVGDLRGINDWSFLKSLDETGSANYTNYNCSGFYPGFDKMHPGVRAGH | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci2g1144 | 189 | MobiDBLite | consensus disorder prediction | 117 | 139 | - | - | |
Prci2g1144 | 189 | FunFam | Ethylene-responsive transcription factor 2 | 24 | 82 | - | - | |
Prci2g1144 | 189 | CDD | AP2 | 24 | 83 | IPR001471 | GO:0003700|GO:0006355 | |
Prci2g1144 | 189 | PRINTS | Ethylene responsive element binding protein signature | 47 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Prci2g1144 | 189 | PRINTS | Ethylene responsive element binding protein signature | 25 | 36 | IPR001471 | GO:0003700|GO:0006355 | |
Prci2g1144 | 189 | ProSiteProfiles | AP2/ERF domain profile. | 24 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Prci2g1144 | 189 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 19 | 127 | - | - | |
Prci2g1144 | 189 | Pfam | AP2 domain | 24 | 73 | IPR001471 | GO:0003700|GO:0006355 | |
Prci2g1144 | 189 | SUPERFAMILY | DNA-binding domain | 24 | 82 | IPR016177 | GO:0003677 | |
Prci2g1144 | 189 | Gene3D | AP2/ERF domain | 23 | 82 | IPR036955 | GO:0003700|GO:0006355 | |
Prci2g1144 | 189 | SMART | rav1_2 | 24 | 87 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci2g1144 | Prci-Chr2 | 8460419 | 8461366 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci2g1144 | 14 | 179 | AP2-EREBP Transcription Factor Family | AT1G19210 | 51.205 | 5.13e-46 | 148 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Prci2g1144 | AP2 | 1.7e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci2g1144 | - | - | pcin:129301731 | 398.282 |